RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SUMF1Q8NBK3 374 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 OR5B17Q8NGF7 314 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 SNX21Q969T3 373 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 PKMYT1Q99640 499 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 TRIM9Q9C026 710 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 SMG9Q9H0W8 520 aaKnown RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 ATXN3LQ9H3M9 355 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 SLITRK6Q9H5Y7 841 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 TRPV5Q9NQA5 729 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 RBAKQ9NYW8 714 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-203ENST00000430038 HSFX1Q9UBD0 423 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 EXOC7Q9UPT5 735 aa18.43■□□□□ 0.54
CPSF4-203ENST00000430038 EXTL3O43909 919 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 PPP6R2O75170 966 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 LMNAP02545 664 aaKnown RBP18.42■□□□□ 0.54
CPSF4-203ENST00000430038 ACAT1P24752 427 aaKnown RBP18.42■□□□□ 0.54
CPSF4-203ENST00000430038 FCHO2Q0JRZ9 810 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 PLD1Q13393 1074 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 GAS6Q14393 721 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 MGAT5BQ3V5L5 792 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 GPR158Q5T848 1215 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 EPM2AIP1Q7L775 607 aaPredicted RBP18.42■□□□□ 0.54
CPSF4-203ENST00000430038 NT5DC4Q86YG4 428 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 CBWD2Q8IUF1 395 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 SYCP3Q8IZU3 236 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 DCLK2Q8N568 766 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 CSGALNACT2Q8N6G5 542 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 TTC8Q8TAM2 541 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 NELL1Q92832 810 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 IRF7Q92985 503 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 DHX58Q96C10 678 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 SLC46A2Q9BY10 475 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 MTMR12Q9C0I1 747 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 ABI2Q9NYB9 513 aaPredicted RBP18.42■□□□□ 0.54
CPSF4-203ENST00000430038 DSEQ9UL01 958 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 ASB3Q9Y575 518 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 PIAS3Q9Y6X2 628 aa18.42■□□□□ 0.54
CPSF4-203ENST00000430038 PTPRDP23468 1912 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 ZNF263O14978 683 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 TGFB1I1O43294 461 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 LAMTOR5O43504 91 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 TDGF1P13385 188 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 CCNE1P24864 410 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 RPS9P46781 194 aaKnown RBP18.41■□□□□ 0.54
CPSF4-203ENST00000430038 SV2CQ496J9 727 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 TXNDC11Q6PKC3 985 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 METTL23Q86XA0 190 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 THEM5Q8N1Q8 247 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 RIN3Q8TB24 985 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 KCNG4Q8TDN1 519 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 NOC3LQ8WTT2 800 aaKnown RBP18.41■□□□□ 0.54
CPSF4-203ENST00000430038 DEPDC1BQ8WUY9 529 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 CHAMP1Q96JM3 812 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 NELL2Q99435 816 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 PI4K2AQ9BTU6 479 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
CPSF4-203ENST00000430038 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 ATP2C2O75185 946 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 LDHAP00338 332 aaKnown RBP18.4■□□□□ 0.54
CPSF4-203ENST00000430038 F11P03951 625 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 CHRNB1P11230 501 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 TUFMP49411 452 aaKnown RBP18.4■□□□□ 0.54
CPSF4-203ENST00000430038 TNK2Q07912 1038 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 EHHADHQ08426 723 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 BFSP1Q12934 665 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 SOWAHAQ2M3V2 549 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 ZNF528Q3MIS6 628 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 LIMS2Q7Z4I7 341 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 CCDC65Q8IXS2 484 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 GPD1LQ8N335 351 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 ZNF507Q8TCN5 953 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 FAM3CQ92520 227 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
CPSF4-203ENST00000430038 TNMDQ9H2S6 317 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 LMAN1LQ9HAT1 526 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 RBM12Q9NTZ6 932 aaKnown RBP18.4■□□□□ 0.54
CPSF4-203ENST00000430038 C2orf42Q9NWW7 574 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 GTSE1Q9NYZ3 720 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 FBXO4Q9UKT5 387 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 PCDHA7Q9UN72 937 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
CPSF4-203ENST00000430038 SLC38A8A6NNN8 435 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CHADO15335 359 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CUTAO60888 179 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 YEATS4O95619 227 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CYP2F1P24903 491 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 ALCAMQ13740 583 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 DDR2Q16832 855 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CNNM4Q6P4Q7 775 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 ZBTB44Q8NCP5 570 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 SPPL2BQ8TCT7 592 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 C7orf25Q9BPX7 421 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 BLZF1Q9H2G9 400 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CHRDQ9H2X0 955 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 TASP1Q9H6P5 420 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 TMEM206Q9H813 350 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 PRMT8Q9NR22 394 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-203ENST00000430038 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms