RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 GUF1Q8N442 669 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM149B1Q96BN6 582 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF219Q9P2Y4 722 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ADAMTS1Q9UHI8 967 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 NPHP4O75161 1426 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC53A6NM62 1247 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 BACH1O14867 736 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 MAGEC1O60732 1142 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 KLHL18O94889 574 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 CTDNEP1O95476 244 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GYPCP04921 128 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 EDRF1Q3B7T1 1238 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ADGRG6Q86SQ4 1221 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC6Q86X45 466 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 NAT9Q9BTE0 207 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TRABDQ9H4I3 376 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 C20orf96Q9NUD7 363 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 ANKRD36CQ5JPF3 1778 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PHRF1Q9P1Y6 1649 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 CENPXA8MT69 81 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 TSPAN1O60635 241 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PSMG1O95456 288 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 CCNB1P14635 433 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 RPL17P18621 184 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 POLR2BP30876 1174 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 BFSP1Q12934 665 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 GEN1Q17RS7 908 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PPM1KQ8N3J5 372 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 PCYOX1LQ8NBM8 494 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 MAML1Q92585 1016 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 YME1L1Q96TA2 773 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 RAB20Q9NX57 234 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 KDM3BQ7LBC6 1761 aa7.86□□□□□ -1.15
SYNPO2-202ENST00000429713 UBOX5O94941 541 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ITGA1P56199 1179 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF394Q53GI3 561 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MFSD14BQ5SR56 506 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 IZUMO2Q6UXV1 221 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 EFL1Q7Z2Z2 1120 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PLD3Q8IV08 490 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZBED2Q9BTP6 218 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SNX25Q9H3E2 840 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CCNB1IP1Q9NPC3 277 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC5A4Q9NY91 659 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 USP31Q70CQ4 1352 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ERBB3P21860 1342 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM64CA6NLI5 447 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 FOXN1O15353 648 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CFBP00751 764 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TNNC2P02585 160 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ARL1P40616 181 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CDKAL1Q5VV42 579 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 C11orf63Q6NUN7 778 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CAPN12Q6ZSI9 719 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC6A15Q9H2J7 730 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 GTPBP10A4D1E9 387 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CFAP69A5D8W1 941 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM24O15164 1050 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CYP11B2P19099 503 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PTGS2P35354 604 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 GRK3P35626 688 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 GRIK1P39086 918 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MRPS9P82933 396 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SP4Q02446 784 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF844Q08AG5 666 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SGMS1Q86VZ5 419 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZCCHC7Q8N3Z6 543 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF555Q8NEP9 628 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TTLL11Q8NHH1 800 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MLXIPQ9HAP2 919 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ZMYM2Q9UBW7 1377 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CD163L1Q9NR16 1453 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PIK3R2O00459 728 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TCEA3O75764 348 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 GRK2P25098 689 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 HNRNPH3P31942 346 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 RXRGP48443 463 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TMC3Q7Z5M5 1100 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MED30Q96HR3 178 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 VCPIP1Q96JH7 1222 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 FBXO2Q9UK22 296 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ALADP13716 330 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CASP5P51878 434 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MAPK7Q13164 816 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 KRT74Q7RTS7 529 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC103Q8IW40 242 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TTC29Q8NA56 475 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TSPAN14Q8NG11 270 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SNX27Q96L92 541 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TSC22D2O75157 780 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 GP5P40197 560 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CAPRIN1Q14444 709 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PFKFB3Q16875 520 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MMS19Q96T76 1030 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 AIFM2Q9BRQ8 373 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 OR2B2Q9GZK3 357 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TUBGCP4Q9UGJ1 667 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms