RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 COBLL1Q53SF7 1204 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SGO2Q562F6 1265 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 UBAP2Q5T6F2 1119 aaKnown RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 AGMOQ6ZNB7 445 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SGMS1Q86VZ5 419 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 LURAP1LQ8IV03 231 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SPARTQ8N0X7 666 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZBTB38Q8NAP3 1195 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 GDPD5Q8WTR4 605 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMEM87BQ96K49 555 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 FBXL18Q96ME1 805 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC26A6Q9BXS9 759 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CCSER1Q9C0I3 900 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SIAEQ9HAT2 523 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CD209Q9NNX6 404 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CABP5Q9NP86 173 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CEP72Q9P209 647 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 STK39Q9UEW8 545 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 LRP5O75197 1615 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 KRBA1A5PL33 1030 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 AP3B1O00203 1094 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 KPNA4O00629 521 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TXNDC9O14530 226 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 USP1O94782 785 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CYP19A1P11511 503 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ATP6V1B1P15313 513 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDE6AP16499 860 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 HSPA6P17066 643 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CTRB1P17538 263 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 LMNB1P20700 586 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ADSLP30566 484 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFNA8P32881 189 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 EPS15P42566 896 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC5A3P53794 718 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 NR5A1Q13285 461 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TXNRD1Q16881 649 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CYFIP1Q7L576 1253 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 LPCAT2Q7L5N7 544 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 OTOAQ7RTW8 1153 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TERB1Q8NA31 727 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TPCN2Q8NHX9 752 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ART4Q93070 314 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 DHRS9Q9BPW9 319 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 AIFM2Q9BRQ8 373 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 IL20Q9NYY1 176 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 GPRC5DQ9NZD1 345 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ANKFY1Q9P2R3 1169 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 EXOC7Q9UPT5 735 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ERGIC3Q9Y282 383 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 IKBKGQ9Y6K9 419 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 NID2Q14112 1375 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 DOT1LQ8TEK3 1739 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 A0A087X0T9 212 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 A0A0A6YYK5 440 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 TLR2O60603 784 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ICMTO60725 284 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 DNAJA2O60884 412 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 C8BP07358 591 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM228BP0C875 321 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CHRNA3P32297 505 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PTGIRP43119 386 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 RPL21P46778 160 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 IGBP1P78318 339 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 NCOA4Q13772 614 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 WTAPQ15007 396 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 EXOC3L4Q17RC7 722 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZFYVE27Q5T4F4 411 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 C1orf146Q5VVC0 180 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 TRIM22Q8IYM9 498 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ULK2Q8IYT8 1036 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PEX13Q92968 403 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZNF641Q96N77 438 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PSKH2Q96QS6 385 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 GLT8D2Q9H1C3 349 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCYOX1Q9UHG3 505 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 KCNJ14Q9UNX9 436 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 SUGT1Q9Y2Z0 365 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MTO1Q9Y2Z2 717 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCDHA3Q9Y5H8 950 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARHGAP33O14559 1287 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 KLRC4O43908 158 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMCC2O75069 709 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CAMTA2O94983 1202 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 DEXIO95424 95 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 NAGAP17050 411 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 DDX5P17844 614 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CCNCP24863 283 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ATP2C1P98194 919 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms