RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 LIMS2Q7Z4I7 341 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 MAATS1Q7Z4T9 603 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 CCDC26Q8TAB7 109 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 BTBD6Q96KE9 485 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 KRT12Q99456 494 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 FUT8Q9BYC5 575 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 GDF3Q9NR23 364 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.13■□□□□ 0.81
HDAC10-204ENST00000429374 TUBGCP4Q9UGJ1 667 aa20.13■□□□□ 0.81
HDAC10-204ENST00000429374 O00370 1275 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 MAP2K7O14733 419 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 NDST1P52848 882 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 FBXO47Q5MNV8 452 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 DENND1BQ6P3S1 775 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 MRPL10Q7Z7H8 261 aaKnown RBP20.12■□□□□ 0.81
HDAC10-204ENST00000429374 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 MAIP1Q8WWC4 291 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 HEXIM2Q96MH2 286 aaKnown RBP20.12■□□□□ 0.81
HDAC10-204ENST00000429374 TWNKQ96RR1 684 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 FAM105AQ9NUU6 356 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 SLC38A7Q9NVC3 462 aa20.12■□□□□ 0.81
HDAC10-204ENST00000429374 BHMG1C9JSJ3 638 aaPredicted RBP20.11■□□□□ 0.81
HDAC10-204ENST00000429374 SART1O43290 800 aaKnown RBP20.11■□□□□ 0.81
HDAC10-204ENST00000429374 ZNF623O75123 536 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 RAB27AP51159 221 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 RNASE9P60153 205 aaKnown RBP20.11■□□□□ 0.81
HDAC10-204ENST00000429374 ITGA7Q13683 1181 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 PIGHQ14442 188 aaPredicted RBP20.11■□□□□ 0.81
HDAC10-204ENST00000429374 SV2CQ496J9 727 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 DNAJC24Q6P3W2 148 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 NIPA2Q8N8Q9 360 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 FNIP1Q8TF40 1166 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 C18orf25Q96B23 403 aaPredicted RBP20.11■□□□□ 0.81
HDAC10-204ENST00000429374 C18orf8Q96DM3 657 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 RUNDC3BQ96NL0 473 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 CXCL16Q9H2A7 254 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 GIT1Q9Y2X7 761 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 SNX9Q9Y5X1 595 aa20.11■□□□□ 0.81
HDAC10-204ENST00000429374 SIGLEC16A6NMB1 481 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 MICAL2O94851 1124 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 SEC31AO94979 1220 aaKnown RBP20.1■□□□□ 0.81
HDAC10-204ENST00000429374 SETSIPP0DME0 302 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 GPD2P43304 727 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 TAF6P49848 677 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 ACLYP53396 1101 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 LRRC38Q5VT99 294 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 RHOT1Q8IXI2 618 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 HDAC7Q8WUI4 952 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 WNT8BQ93098 351 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 PPP1R10Q96QC0 940 aaKnown RBP20.1■□□□□ 0.81
HDAC10-204ENST00000429374 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 ERVK-5Q9HDB9 667 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
HDAC10-204ENST00000429374 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
HDAC10-204ENST00000429374 KPNA7A9QM74 516 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 FAM43BQ6ZT52 329 aaPredicted RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 CRYBG2Q8N1P7 616 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 VIPAS39Q9H9C1 493 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 HMGXB4Q9UGU5 601 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 MTUS1Q9ULD2 1270 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 FAM170AA1A519 330 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 FSCN2O14926 492 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 RAD51CO43502 376 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 FKTNO75072 461 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 HEXIM1O94992 359 aaKnown RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 PYGMP11217 842 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 SKIP12755 728 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 ITGA4P13612 1032 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 SSTR3P32745 418 aaPredicted RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 EPHB4P54760 987 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 SNX16P57768 344 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 NNTQ13423 1086 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 ACAP1Q15027 740 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 CYP1B1Q16678 543 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 TRIM71Q2Q1W2 868 aaKnown RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 PTPN20Q4JDL3 420 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 GLRA4Q5JXX5 417 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 ARHGAP17Q68EM7 881 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 EMBQ6PCB8 327 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 SLC13A5Q86YT5 568 aaPredicted RBP20.09■□□□□ 0.81
HDAC10-204ENST00000429374 KATNAL2Q8IYT4 538 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 TMEM130Q8N3G9 435 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 STK32AQ8WU08 396 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 GLT1D1Q96MS3 346 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 AP1M1Q9BXS5 423 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 TRIM7Q9C029 511 aa20.09■□□□□ 0.81
HDAC10-204ENST00000429374 PTGESO14684 152 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 PPEF2O14830 753 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 GLI1P08151 1106 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 PAX3P23760 479 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 CHRNA3P32297 505 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 THPOP40225 353 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 MARCKSL1P49006 195 aa20.08■□□□□ 0.8
HDAC10-204ENST00000429374 NFX1Q12986 1120 aaKnown RBP20.08■□□□□ 0.8
HDAC10-204ENST00000429374 DHX34Q14147 1143 aaKnown RBP20.08■□□□□ 0.8
HDAC10-204ENST00000429374 SOWAHAQ2M3V2 549 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms