RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 GLRA2P23416 452 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 SLC1A1P43005 524 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 ACTR3P61158 418 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 GABPAQ06546 454 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 MSLNQ13421 630 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 MSS51Q4VC12 460 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 EFHC2Q5JST6 749 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 FAM20AQ96MK3 541 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 PLIN4Q96Q06 1357 aa17.25■□□□□ 0.35
RHBDF1-204ENST00000428730 CIB2O75838 187 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ADRB2P07550 413 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MAGEA10P43363 369 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 AQP4P55087 323 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 CLEC16AQ2KHT3 1053 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 FAM182AQ5T1J6 154 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ACAD11Q709F0 780 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 DAW1Q8N136 415 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ARHGAP24Q8N264 748 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 STKLD1Q8NE28 680 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MZB1Q8WU39 189 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 LENG1Q96BZ8 264 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 IWS1Q96ST2 819 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 WDR83Q9BRX9 315 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 DDX4Q9NQI0 724 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 SLC24A2Q9UI40 661 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 F8W8V4 182 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ALOX15BO15296 676 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MAGEC1O60732 1142 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 SORBS2O94875 1100 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MAP3K10Q02779 954 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ZFYVE27Q5T4F4 411 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ACBD5Q5T8D3 534 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 NET1Q7Z628 596 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MTBPQ96DY7 904 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 VPS11Q9H270 941 aa17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 MARCOQ9UEW3 520 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 ZNFX1Q9P2E3 1918 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-204ENST00000428730 LIASO43766 372 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 CYP3A4P08684 503 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 UBXN2AP68543 259 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 CCDC142Q17RM4 750 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TMPRSS6Q8IU80 811 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 MCOLN2Q8IZK6 566 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 HELQQ8TDG4 1101 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SH2D3AQ9BRG2 576 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 MECRQ9BV79 373 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 DDX18Q9NVP1 670 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 CAPN14A8MX76 684 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TM7SF2O76062 418 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 KITP10721 976 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TM4SF1P30408 202 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 MFAP3P55082 362 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 AP3B2Q13367 1082 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TRMT5Q32P41 509 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 ANKRD22Q5VYY1 191 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 NLRX1Q86UT6 975 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 PDSS2Q86YH6 399 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SLC9A9Q8IVB4 645 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 NME8Q8N427 588 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 ZNF513Q8N8E2 541 aaPredicted RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 WDR18Q9BV38 432 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TXNDC9O14530 226 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 LPXNO60711 386 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 PEX2P28328 305 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SREBF1P36956 1147 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 ALCAMQ13740 583 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 DLGAP5Q15398 846 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 RNASEH2BQ5TBB1 312 aaKnown RBP17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 STXBP4Q6ZWJ1 553 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 USP6NLQ92738 828 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 SERAC1Q96JX3 654 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TMEM121Q9BTD3 319 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 IL1RAPL1Q9NZN1 696 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 ZNF510Q9Y2H8 683 aa17.23■□□□□ 0.35
RHBDF1-204ENST00000428730 TTC36A6NLP5 189 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 PDE1BQ01064 536 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 NCOA4Q13772 614 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 CENPUQ71F23 418 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
RHBDF1-204ENST00000428730 CBWD2Q8IUF1 395 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms