RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 C12orf42Q96LP6 360 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ACO2Q99798 780 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 EIF2AQ9BY44 585 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MAF1Q9H063 256 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 CDT1Q9H211 546 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 CDC42EP4Q9H3Q1 356 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 SPON1Q9HCB6 807 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 NGRNQ9NPE2 291 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 ADAMTS5Q9UNA0 930 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 GOLGA6L7A0A1B0GV03 622 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 A6NNZ2 444 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MIF4GDA9UHW6 222 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 H0YGN5 161 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MEFVO15553 781 aaPredicted RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 SHOX2O60902 331 aaPredicted RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 GZMAP12544 262 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ARF4P18085 180 aaPredicted RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 PSMA2P25787 234 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ZNF252P-AS1Q0IIN9 211 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 GPS1Q13098 491 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 NEDD9Q14511 834 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 PSMD6Q15008 389 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 TUBB8Q3ZCM7 444 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 OR6B2Q6IFH4 312 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 C11orf63Q6NUN7 778 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 DPY19L2Q6NUT2 758 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ERO1BQ86YB8 467 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 RIOX2Q8IUF8 465 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ZBTB8OSQ8IWT0 167 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 ABRAQ8N0Z2 381 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 C1orf127Q8N9H9 656 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MRPL4Q9BYD3 311 aaKnown RBP8.85□□□□□ -0.99
CD44-208ENST00000428726 RNF39Q9H2S5 420 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 EPB41L4BQ9H329 900 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 KCNG1Q9UIX4 513 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MTUS1Q9ULD2 1270 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 COQ4Q9Y3A0 265 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 NFS1Q9Y697 457 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 BPTFQ12830 3046 aa8.85□□□□□ -0.99
CD44-208ENST00000428726 MYO15AQ9UKN7 3530 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 I3L4J1 428 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 STAM2O75886 525 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ABCD1P33897 745 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 RTP1P59025 263 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ENPEPQ07075 957 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 TMED2Q15363 201 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 SIX1Q15475 284 aaPredicted RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 FAM160B1Q5W0V3 765 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 NLRP14Q86W24 1093 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 CCDC125Q86Z20 511 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 TTC16Q8NEE8 873 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 KIF12Q96FN5 646 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 FBXL18Q96ME1 805 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 CFAP57Q96MR6 1250 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ELAC2Q9BQ52 826 aaKnown RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 VPS37BQ9H9H4 285 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 RPF1Q9H9Y2 349 aaKnown RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 ZDHHC18Q9NUE0 388 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ANAPC5Q9UJX4 755 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 PCDHA3Q9Y5H8 950 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 MYO18AQ92614 2054 aaKnown RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 NFASCO94856 1347 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 H0YCG3 227 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 ATP2A1O14983 1001 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 TOM1L1O75674 476 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 LGALS2P05162 132 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 GMPRP36959 345 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 MDH1P40925 334 aaKnown RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 FAM133BQ5BKY9 247 aaKnown RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 FAM102AQ5T9C2 384 aaPredicted RBP8.84□□□□□ -0.99
CD44-208ENST00000428726 MICALCLQ6ZW33 695 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 OSBPL7Q9BZF2 842 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 SAYSD1Q9NPB0 183 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 FAM114A2Q9NRY5 505 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 IL1RAPL1Q9NZN1 696 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 PHIPQ8WWQ0 1821 aa8.84□□□□□ -0.99
CD44-208ENST00000428726 TCRBV7S3A2A0A539 114 aa8.83□□□□□ -1
CD44-208ENST00000428726 H3BRB1 525 aa8.83□□□□□ -1
CD44-208ENST00000428726 MAFO75444 373 aaPredicted RBP8.83□□□□□ -1
CD44-208ENST00000428726 CSPG5O95196 566 aa8.83□□□□□ -1
CD44-208ENST00000428726 LCP1P13796 627 aa8.83□□□□□ -1
CD44-208ENST00000428726 GARTP22102 1010 aa8.83□□□□□ -1
CD44-208ENST00000428726 ARSEP51690 589 aa8.83□□□□□ -1
CD44-208ENST00000428726 FAM47CQ5HY64 1035 aa8.83□□□□□ -1
CD44-208ENST00000428726 IZUMO3Q5VZ72 239 aa8.83□□□□□ -1
CD44-208ENST00000428726 FAM71DQ8N9W8 422 aa8.83□□□□□ -1
CD44-208ENST00000428726 CHST13Q8NET6 341 aa8.83□□□□□ -1
CD44-208ENST00000428726 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
CD44-208ENST00000428726 MORC4Q8TE76 937 aa8.83□□□□□ -1
CD44-208ENST00000428726 DNAJB3Q8WWF6 145 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms