RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 VN1R3Q9BXE9 311 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 PBX4Q9BYU1 374 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDCL3Q9H2J4 239 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 NKX2-4Q9H2Z4 354 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 DPEP3Q9H4B8 488 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 DEF6Q9H4E7 631 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 ACP6Q9NPH0 428 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM49BQ9NUQ9 324 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SEPT11Q9NVA2 429 aaKnown RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 AIPL1Q9NZN9 384 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CNTN6Q9UQ52 1028 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 STXBP5LQ9Y2K9 1186 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CEP290O15078 2479 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 H7C4K7 107 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 MED7O43513 233 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SOD2P04179 222 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 PLEKP08567 350 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM163BP0C2L3 166 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC130P13994 396 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYP11B1P15538 503 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 LMO2P25791 158 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 HNRNPH3P31942 346 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CLCN1P35523 988 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 BMPR1AP36894 532 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 EIF4A3P38919 411 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 TAP1Q03518 808 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 PSMD5Q16401 504 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 MEA1Q16626 185 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 USP41Q3LFD5 358 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SGO2Q562F6 1265 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 MDH1BQ5I0G3 518 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 PRSS55Q6UWB4 352 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYP26C1Q6V0L0 522 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 TAS1R1Q7RTX1 841 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SPRED2Q7Z698 418 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 DDX53Q86TM3 631 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 NOP9Q86U38 636 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 VPS52Q8N1B4 723 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC4A11Q8NBS3 891 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 B3GALNT2Q8NCR0 500 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC112Q8NEF3 446 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 FBXO22Q8NEZ5 403 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 OR10T2Q8NGX3 314 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC20A1Q8WUM9 679 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 HEXIM2Q96MH2 286 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 TGS1Q96RS0 853 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 PLVAPQ9BX97 442 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC28A3Q9HAS3 691 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 ENTPD7Q9NQZ7 604 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 STK39Q9UEW8 545 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 NOCTQ9UK39 431 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDH9Q9ULB4 789 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 NME7Q9Y5B8 376 aa8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 BZW2Q9Y6E2 419 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDCD11Q14690 1871 aaKnown RBP8.42□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM170AA1A519 330 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SOWAHDA6NJG2 315 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 OR6C75A6NL08 312 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 M0QYV0 167 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 GABRDO14764 452 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 AKR1B10O60218 316 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ATP2C2O75185 946 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 OAZ2O95190 189 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 OR4Q2P0C623 313 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 VDRP11473 427 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CPB1P15086 417 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 PTPN1P18031 435 aaKnown RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ADORA2BP29275 332 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 PRKCIP41743 596 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDR1P51861 262 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ARPP19P56211 112 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDK17Q00537 523 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDR2Q01850 454 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYP27A1Q02318 531 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 DSG1Q02413 1049 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CREMQ03060 361 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC142Q17RM4 750 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 GOLGA7BQ2TAP0 167 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 HGSNATQ68CP4 663 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SMYD5Q6GMV2 418 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 WDR59Q6PJI9 974 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 IRF2BP2Q7Z5L9 587 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMTC1Q8IUR5 882 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 PASD1Q8IV76 773 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 GLYCTKQ8IVS8 523 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 LRRC8AQ8IWT6 810 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 RNF168Q8IYW5 571 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 C12orf29Q8N999 325 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC2A14Q8TDB8 520 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 AUTS2Q8WXX7 1259 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms