RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TLR1Q15399 786 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 EFHC2Q5JST6 749 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 OGFRL1Q5TC84 451 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 PYDC1Q8WXC3 89 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 ATG4AQ8WYN0 398 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 MRPL1Q9BYD6 325 aaKnown RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 CROTQ9UKG9 612 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF804BA4D1E1 1349 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 NFASCO94856 1347 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 FBP2O00757 339 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 ATMINO43313 823 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 CYP1A2P05177 515 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 DHRS4L1P0CG22 281 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 GZMAP12544 262 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 PMLP29590 882 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 TRIP10Q15642 601 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 THOC7Q6I9Y2 204 aaKnown RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 SLC25A41Q8N5S1 370 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 SCAIQ8N9R8 606 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 COX4I2Q96KJ9 171 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-206ENST00000428313 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
C9orf3-206ENST00000428313 KLF11O14901 512 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 VCPP55072 806 aaKnown RBP16.88■□□□□ 0.29
C9orf3-206ENST00000428313 NFIL3Q16649 462 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 ARSHQ5FYA8 562 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 ALYREFQ86V81 257 aaKnown RBP16.88■□□□□ 0.29
C9orf3-206ENST00000428313 ARL10Q8N8L6 244 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 GSTCDQ8NEC7 633 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 SLC20A1Q8WUM9 679 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 UBAP1Q9NZ09 502 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 RSL24D1Q9UHA3 163 aaKnown RBP16.88■□□□□ 0.29
C9orf3-206ENST00000428313 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
C9orf3-206ENST00000428313 SOX13Q9UN79 622 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 DTNAQ9Y4J8 743 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 MAST2Q6P0Q8 1798 aa16.88■□□□□ 0.29
C9orf3-206ENST00000428313 COL6A2P12110 1019 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 ADSSP30520 456 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 PSMC2P35998 433 aaKnown RBP16.87■□□□□ 0.29
C9orf3-206ENST00000428313 NAA20P61599 178 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 GIPC3Q8TF64 312 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 PYROXD1Q8WU10 500 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 NUP85Q9BW27 656 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 OSBPL6Q9BZF3 934 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 HESX1Q9UBX0 185 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 F5H6K3 240 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 CYP2D6P10635 497 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 KLRC2P26717 231 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 CDK9P50750 372 aaKnown RBP16.87■□□□□ 0.29
C9orf3-206ENST00000428313 CCNIQ14094 377 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 POTEHQ6S545 545 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 HAS1Q92839 578 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 VPS37BQ9H9H4 285 aa16.87■□□□□ 0.29
C9orf3-206ENST00000428313 DNAJA2O60884 412 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 LRRN2O75325 713 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ADAMTS2O95450 1211 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CPOXP36551 454 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ERFP50548 548 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 KDSRQ06136 332 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CCNG2Q16589 344 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CPNE8Q86YQ8 564 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 KSR1Q8IVT5 923 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 TRPC4APQ8TEL6 797 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 DHRS1Q96LJ7 313 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CCDC106Q9BWC9 280 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 WWP1Q9H0M0 922 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 FOXN3O00409 490 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ALOX15BO15296 676 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 PDAP1Q13442 181 aaKnown RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF423Q2M1K9 1284 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CCDC153Q494R4 210 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 SLC26A7Q8TE54 656 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 MZB1Q8WU39 189 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 CGREF1Q99674 301 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 SLC17A7Q9P2U7 560 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 PPARGC1AQ9UBK2 798 aaKnown RBP16.86■□□□□ 0.29
C9orf3-206ENST00000428313 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 MAD1L1Q9Y6D9 718 aa16.86■□□□□ 0.29
C9orf3-206ENST00000428313 ATRNL1Q5VV63 1379 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 DNALI1O14645 258 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 STARD3NLO95772 234 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 GSTT2P0CG29 244 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms