RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 KINO60870 393 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 ECI2O75521 394 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 CSPG5O95196 566 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 P4HA1P13674 534 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 TNNI1P19237 187 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 WARSP23381 471 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 FSHRP23945 695 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 IGFBP6P24592 240 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 POLR2BP30876 1174 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PSMC2P35998 433 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 EPHB3P54753 998 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 FKBP3Q00688 224 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 TSPY1Q01534 308 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 STIM1Q13586 685 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PRSS36Q5K4E3 855 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 CYP4A22Q5TCH4 519 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 FAM171BQ6P995 826 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 C1orf228Q6PIY5 440 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PDCL2Q8N4E4 241 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 ASIC4Q96FT7 647 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 TRMT2BQ96GJ1 504 aaKnown RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 DHTKD1Q96HY7 919 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 HPDLQ96IR7 371 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 MYRFLQ96LU7 910 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 ZNF512Q96ME7 567 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PKMYT1Q99640 499 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 MTMR12Q9C0I1 747 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 GZF1Q9H116 711 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PCIF1Q9H4Z3 704 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 EPHX3Q9H6B9 360 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 CYP4F11Q9HBI6 524 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 C11orf16Q9NQ32 467 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 AGAP1Q9UPQ3 857 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 NOTCH4Q99466 2003 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PIEZO1Q92508 2521 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 GOLGA8IPA6NC78 632 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 GOLGA8JA6NMD2 632 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 I3L4J1 428 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 PPEF2O14830 753 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 C4BPAP04003 597 aaKnown RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 RHOP08100 348 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 SRFP11831 508 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 NR2F2P24468 414 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 DDX6P26196 483 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 CASP1P29466 404 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 MLLT3P42568 568 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 ALDH1A3P47895 512 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 PPP3CCP48454 512 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 WNT7BP56706 349 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 RPL10AP62906 217 aaKnown RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 PFKPQ01813 784 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 SPAG1Q07617 926 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 HTR4Q13639 388 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 SOWAHAQ2M3V2 549 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 SGSM1Q2NKQ1 1148 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 INTS6LQ5JSJ4 861 aaKnown RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 WSCD1Q658N2 575 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 UNC93AQ86WB7 457 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 NELFCDQ8IXH7 590 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 GRAMD1CQ8IYS0 662 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 ADSSL1Q8N142 457 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 OR5B17Q8NGF7 314 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 FGF13Q92913 245 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 SMARCE1Q969G3 411 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 MSANTD3Q96H12 275 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 CEP63Q96MT8 703 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 LRRC3Q9BY71 257 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 OSBPL6Q9BZF3 934 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 XYLT2Q9H1B5 865 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 IRF2BPLQ9H1B7 796 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 IKZF4Q9H2S9 585 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 KCNK12Q9HB15 430 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 ASAH2Q9NR71 780 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 DNMT3BQ9UBC3 853 aaKnown RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 UXTQ9UBK9 157 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-203ENST00000428014 MUTYHQ9UIF7 546 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 L1RE1Q9UN81 338 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 YIPF1Q9Y548 306 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 PCDHB5Q9Y5E4 795 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 PCDHA5Q9Y5H7 936 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 TRIOO75962 3097 aa9.8□□□□□ -0.84
SMC1A-203ENST00000428014 BICDL2A1A5D9 508 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 PSMA7O14818 248 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CETN3O15182 167 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 P4HA2O15460 535 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 N4BP1O75113 896 aaKnown RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 SEC24AO95486 1093 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 VNN2O95498 520 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 ASS1P00966 412 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms