RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 CASP1P29466 404 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 CYP2J2P51589 502 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 TEAD2Q15562 447 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 TAF12Q16514 161 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 KNOP1Q1ED39 458 aaKnown RBP16.3■□□□□ 0.2
PHF1-204ENST00000427826 ARHGAP15Q53QZ3 475 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 LRRTM3Q86VH5 581 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 TMC8Q8IU68 726 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
PHF1-204ENST00000427826 DEPDC1BQ8WUY9 529 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 DNASE1L2Q92874 299 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 IRF7Q92985 503 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 ZSWIM3Q96MP5 696 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 NELL2Q99435 816 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
PHF1-204ENST00000427826 OSBPL6Q9BZF3 934 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 EXOC1Q9NV70 894 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 L1RE1Q9UN81 338 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 ANK1P16157 1881 aa16.3■□□□□ 0.2
PHF1-204ENST00000427826 A0A1B0GVL5 298 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 A0A1W2PRU2 124 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 CLIC2O15247 247 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 HAPLN1P10915 354 aaPredicted RBP16.29■□□□□ 0.2
PHF1-204ENST00000427826 PFKFB1P16118 471 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 GJA1P17302 382 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 PSMC3P17980 439 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 TNNI1P19237 187 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 PCSK1P29120 753 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 CDC25CP30307 473 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 BECN1Q14457 450 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 PSMD6Q15008 389 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 POTEHQ6S545 545 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 MFSD6LQ8IWD5 586 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 GRAMD1CQ8IYS0 662 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 DDX23Q9BUQ8 820 aaKnown RBP16.29■□□□□ 0.2
PHF1-204ENST00000427826 BRD9Q9H8M2 597 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
PHF1-204ENST00000427826 ABI2Q9NYB9 513 aaPredicted RBP16.29■□□□□ 0.2
PHF1-204ENST00000427826 ZMYM5Q9UJ78 669 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 MRPS17Q9Y2R5 130 aaKnown RBP16.29■□□□□ 0.2
PHF1-204ENST00000427826 SCN1AP35498 2009 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 CACNA1HO95180 2353 aa16.29■□□□□ 0.2
PHF1-204ENST00000427826 SOAT2O75908 522 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 DLATP10515 647 aaKnown RBP16.28■□□□□ 0.2
PHF1-204ENST00000427826 SYKP43405 635 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 CYP24A1Q07973 514 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 ANGPT1Q15389 498 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
PHF1-204ENST00000427826 ZNF852Q6ZMS4 543 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 TRAPPC11Q7Z392 1133 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 ADGRF2Q8IZF7 708 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 CCDC47Q96A33 483 aaKnown RBP16.28■□□□□ 0.2
PHF1-204ENST00000427826 ATXN3LQ9H3M9 355 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 TRPV5Q9NQA5 729 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 FAM86C1Q9NVL1 165 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 HPSEQ9Y251 543 aa16.28■□□□□ 0.2
PHF1-204ENST00000427826 PROB1E7EW31 1015 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 MAN2B1O00754 1011 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 GABRDO14764 452 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 NCAM2O15394 837 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 KLRC4O43908 158 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 EXOC3O60645 756 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 KIF20AO95235 890 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 DCNP07585 359 aaKnown RBP16.27■□□□□ 0.2
PHF1-204ENST00000427826 GABRR2P28476 465 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 WEE1P30291 646 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 MAGEA9P43362 315 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 RPL10AP62906 217 aaKnown RBP16.27■□□□□ 0.2
PHF1-204ENST00000427826 GRM2Q14416 872 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 SOWAHAQ2M3V2 549 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 INTS6LQ5JSJ4 861 aaKnown RBP16.27■□□□□ 0.2
PHF1-204ENST00000427826 VITQ6UXI7 678 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 GAREM2Q75VX8 874 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 LIMS2Q7Z4I7 341 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 CCDC127Q96BQ5 260 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 PHOX2BQ99453 314 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 CGRRF1Q99675 332 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 FOXQ1Q9C009 403 aa16.27■□□□□ 0.2
PHF1-204ENST00000427826 ZNF334Q9HCZ1 680 aaPredicted RBP16.27■□□□□ 0.2
PHF1-204ENST00000427826 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
PHF1-204ENST00000427826 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
PHF1-204ENST00000427826 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
PHF1-204ENST00000427826 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
PHF1-204ENST00000427826 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms