RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 CDC25CP30307 473 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 CTHP32929 405 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 CCR3P51677 355 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 SATB1Q01826 763 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 SV2CQ496J9 727 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 ARHGAP15Q53QZ3 475 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 C1orf228Q6PIY5 440 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 BRSK2Q8IWQ3 736 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 THEM5Q8N1Q8 247 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 C1orf127Q8N9H9 656 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 GIPC2Q8TF65 315 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 SAAL1Q96ER3 474 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 FAM84AQ96KN4 292 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 SLC46A2Q9BY10 475 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 GTSE1Q9NYZ3 720 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 NCDNQ9UBB6 729 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 EXOC7Q9UPT5 735 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 ZNF292O60281 2723 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 PATJQ8NI35 1801 aa14.08□□□□□ -0.16
DEPDC7-203ENST00000427755 DNAH14Q0VDD8 3507 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 DPYSL4O14531 572 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 GCNT3O95395 438 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 GARTP22102 1010 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 TXLNAP40222 546 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 PNPLA4P41247 253 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 CXCL12P48061 93 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 NRLP54845 237 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 TFAMQ00059 246 aaKnown RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 TNK2Q07912 1038 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 PUM1Q14671 1186 aaKnown RBP eCLIP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 VEPH1Q14D04 833 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 SLC39A14Q15043 492 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 CCDC73Q6ZRK6 1079 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 Q6ZS52 159 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 DGLUCYQ7Z3D6 616 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 RALGPS2Q86X27 583 aaPredicted RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 DCP1BQ8IZD4 617 aaKnown RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 PDCL2Q8N4E4 241 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 SPEM1Q8N4L4 309 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 TTC8Q8TAM2 541 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 FAM200AQ8TCP9 573 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 BPIFB1Q8TDL5 484 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 CBWD1Q9BRT8 395 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 SMG9Q9H0W8 520 aaKnown RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 ABI2Q9NYB9 513 aaPredicted RBP14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 L1RE1Q9UN81 338 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 MTMR6Q9Y217 621 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 MIA3Q5JRA6 1907 aa14.07□□□□□ -0.16
DEPDC7-203ENST00000427755 CACNA1AO00555 2505 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 MYH11P35749 1972 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 MED19A0JLT2 244 aaPredicted RBP14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 K7ESF4 209 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 PAPSS2O95340 614 aaPredicted RBP14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 F11P03951 625 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 ITGB3P05106 788 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 IDEP14735 1019 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 GPR15P49685 360 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 DMWDQ09019 674 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 PPP2R5DQ14738 602 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 LEO1Q8WVC0 666 aaPredicted RBP14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 C2orf42Q9NWW7 574 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 RBAKQ9NYW8 714 aaPredicted RBP14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 PCDHB5Q9Y5E4 795 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 TSC2P49815 1807 aa14.06□□□□□ -0.16
DEPDC7-203ENST00000427755 GOLGA8IPA6NC78 632 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 GOLGA8JA6NMD2 632 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 EXTL3O43909 919 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 LDHAP00338 332 aaKnown RBP14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 STAT6P42226 847 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 NASPP49321 788 aaPredicted RBP14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 NLRP12P59046 1061 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 ALCAMQ13740 583 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 CCINQ13939 588 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 LRRC32Q14392 662 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 PON2Q15165 354 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 RSPO4Q2I0M5 234 aaPredicted RBP14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 OSTM1Q86WC4 334 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 GPR161Q8N6U8 529 aaKnown RBP14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 CELF5Q8N6W0 485 aaKnown RBP14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 LRRC52Q8N7C0 313 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 RIN3Q8TB24 985 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
DEPDC7-203ENST00000427755 GCNAQ96QF7 691 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms