RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TIMM13Q9Y5L4 95 aaPredicted RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 COL6A6A6NMZ7 2263 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 DENND4CQ5VZ89 1909 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 A0A087WWV3 80 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 TEX51A0A1B0GUA7 166 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 PLK4O00444 970 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 SYPP08247 313 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CYP3A7P24462 503 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CHMLP26374 656 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 DPP6P42658 865 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 RPL6Q02878 288 aaKnown RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 ZNF33AQ06730 810 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 PPP2R5CQ13362 524 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 TAF1BQ53T94 588 aaPredicted RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 SPDYCQ5MJ68 293 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CENPPQ6IPU0 288 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 LRRC69Q6ZNQ3 347 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 FMNL3Q8IVF7 1028 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 MAB21L3Q8N8X9 362 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CEP120Q8N960 986 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 HMGB4Q8WW32 186 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 C18orf25Q96B23 403 aaPredicted RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 ZMAT2Q96NC0 199 aaKnown RBP10.04□□□□□ -0.8
LSG1-202ENST00000427461 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 BCCIPQ9P287 314 aaKnown RBP eCLIP10.04□□□□□ -0.8
LSG1-202ENST00000427461 TSC2P49815 1807 aa10.04□□□□□ -0.8
LSG1-202ENST00000427461 CAPN8A6NHC0 703 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 B8ZZF3 427 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 SGK1O00141 431 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 SGSM2O43147 1006 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 OBSL1O75147 1896 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 ALDH1A2O94788 518 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 DKK1O94907 266 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 GSPT1P15170 499 aaKnown RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 MCM4P33991 863 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 FXR2P51116 673 aaKnown RBP eCLIP10.03□□□□□ -0.8
LSG1-202ENST00000427461 OSTNP61366 133 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 SEMG2Q02383 582 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 BFSP1Q12934 665 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 EPHA7Q15375 998 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 FAM187BQ17R55 369 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 PLEKHG6Q3KR16 790 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 COLEC12Q5KU26 742 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 KRT25Q7Z3Z0 450 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 PGBD3Q8N328 593 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 CPA6Q8N4T0 437 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 ALLCQ8N6M5 410 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 TXNDC5Q8NBS9 432 aaKnown RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 IL21RQ9HBE5 538 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 TDP1Q9NUW8 608 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 DDX25Q9UHL0 483 aaKnown RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
LSG1-202ENST00000427461 ASB3Q9Y575 518 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 WNT6Q9Y6F9 365 aa10.03□□□□□ -0.8
LSG1-202ENST00000427461 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 MTMR11A4FU01 709 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 SLC27A2O14975 620 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 AP5Z1O43299 807 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 SLC28A2O43868 658 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 MARCH6O60337 910 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 DGAT1O75907 488 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 KLF8O95600 359 aaPredicted RBP10.02□□□□□ -0.81
LSG1-202ENST00000427461 FGF19O95750 216 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 AVPR1AP37288 418 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 CXADRP78310 365 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 YWHAHQ04917 246 aaPredicted RBP10.02□□□□□ -0.81
LSG1-202ENST00000427461 GRIK2Q13002 908 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 GPR17Q13304 367 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 LY6DQ14210 128 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 PDGFRLQ15198 375 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 CCDC157Q569K6 752 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 EMC10Q5UCC4 262 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 CDCA2Q69YH5 1023 aaPredicted RBP10.02□□□□□ -0.81
LSG1-202ENST00000427461 TXNDC8Q6A555 127 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 NCAPH2Q6IBW4 605 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 GALNT15Q8N3T1 639 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 BAHD1Q8TBE0 780 aaPredicted RBP10.02□□□□□ -0.81
LSG1-202ENST00000427461 GIPC2Q8TF65 315 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 EXOC4Q96A65 974 aa10.02□□□□□ -0.81
LSG1-202ENST00000427461 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms