RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 PDLIM7Q9NR12 457 aa15.16■□□□□ 0.02
ERCC3-202ENST00000426778 NOP53Q9NZM5 478 aaKnown RBP15.16■□□□□ 0.02
ERCC3-202ENST00000426778 MARK3P27448 753 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 BPIFB4P59827 614 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 MAPK6Q16659 721 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 RHPN2Q8IUC4 686 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 ALLCQ8N6M5 410 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 TTC8Q8TAM2 541 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 TRIM11Q96F44 468 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 SLC17A7Q9P2U7 560 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
ERCC3-202ENST00000426778 AGTPBP1Q9UPW5 1226 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 TBC1D12O60347 775 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 YY1P25490 414 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-202ENST00000426778 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 SPARCL1Q14515 664 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 BBS9Q3SYG4 887 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 JOSD2Q8TAC2 188 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 FBF1Q8TES7 1133 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-202ENST00000426778 MYOZ2Q9NPC6 264 aa15.15■□□□□ 0.02
ERCC3-202ENST00000426778 TMEM191CA6NGB0 347 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 TCEA3O75764 348 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 GJB1P08034 283 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 TMEM191BP0C7N4 346 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 SRGAP2CP0DJJ0 459 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 CD19P15391 556 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 IL1R2P27930 398 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 RFC1P35251 1148 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 GCLCP48506 637 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 SESN3P58005 492 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 ATP11AP98196 1134 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 OTUD4Q01804 1114 aaKnown RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 RIPK1Q13546 671 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 RAB6CQ53S08 254 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 OTOAQ7RTW8 1153 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 ACTL9Q8TC94 416 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 RAB6CQ9H0N0 254 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 A0A0G2JND7 137 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 ENTPD5O75356 428 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 TJP3O95049 919 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 MMP8P22894 467 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 CTCFP49711 727 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 TFAMQ00059 246 aaKnown RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 SETDB1Q15047 1291 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 MTDHQ86UE4 582 aaKnown RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 ZNF677Q86XU0 584 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 WDTC1Q8N5D0 677 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 GBP7Q8N8V2 638 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 CEP120Q8N960 986 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 DENND1AQ8TEH3 1009 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 WDR83Q9BRX9 315 aaKnown RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 IP6K2Q9UHH9 426 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 CLUHO75153 1309 aa15.14■□□□□ 0.01
ERCC3-202ENST00000426778 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-202ENST00000426778 hCG_1818297A0A087WSY0 165 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CSDE1O75534 798 aaKnown RBP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 T-ENOLP0DO92 83 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CDH8P55286 799 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 RNASEH2BQ5TBB1 312 aaKnown RBP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 RNF43Q68DV7 783 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ABHD15Q6UXT9 468 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 LONP2Q86WA8 852 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 PHF13Q86YI8 300 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 TTLL6Q8N841 843 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 RFWD2Q8NHY2 731 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 LPAR1Q92633 364 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 TEPSINQ96N21 525 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 GINM1Q9NU53 330 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 SCINQ9Y6U3 715 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CST8O60676 142 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ZC3H11AO75152 810 aaKnown RBP eCLIP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ANKRD20A2Q5SQ80 823 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ANKRD20A1Q5TYW2 823 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ANKRD20A3Q5VUR7 823 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 C3orf62Q6ZUJ4 267 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 RFX8Q6ZV50 586 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 PTPRN2Q92932 1015 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 PPP1R16BQ96T49 567 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CISHQ9NSE2 258 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CHMP2BQ9UQN3 213 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 AVILO75366 819 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 NEBLO76041 1014 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ALADP13716 330 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 CETN2P41208 172 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 VCPP55072 806 aaKnown RBP15.13■□□□□ 0.01
ERCC3-202ENST00000426778 MOGSQ13724 837 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 HIF1AQ16665 826 aa15.13■□□□□ 0.01
ERCC3-202ENST00000426778 NPNTQ6UXI9 565 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms