RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PTPROQ16827 1216 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 DENND1BQ6P3S1 775 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 MRPL45Q9BRJ2 306 aaKnown RBP16.13■□□□□ 0.17
ACTB-204ENST00000425660 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 GOLGA2P5Q9HBQ8 144 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 ANAPC7Q9UJX3 599 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 TUBBP07437 444 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 CTNNA1P35221 906 aaKnown RBP16.12■□□□□ 0.17
ACTB-204ENST00000425660 LILRA4P59901 499 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 ORC1Q13415 861 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 STILQ15468 1287 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 SV2CQ496J9 727 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 DCAF12L1Q5VU92 463 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 FBXO38Q6PIJ6 1188 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 DPH6Q7L8W6 267 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 BTBD6Q96KE9 485 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
ACTB-204ENST00000425660 GAD1Q99259 594 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 PARD6BQ9BYG5 372 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 RAB21Q9UL25 225 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 STRIP2Q9ULQ0 834 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 CCDC66A2RUB6 948 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 ARL5CA6NH57 179 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 MYO1FO00160 1098 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 THP07101 528 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 FAM163BP0C2L3 166 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 SKIP12755 728 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 CTNNA2P26232 953 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 SLC1A1P43005 524 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 GPD2P43304 727 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 PEX5P50542 639 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 MBTPS1Q14703 1052 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 LLGL2Q6P1M3 1020 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 ERICH1Q86X53 443 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 UBL4BQ8N7F7 174 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 KBTBD7Q8WVZ9 684 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 ALG3Q92685 438 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.12■□□□□ 0.172e-24■■□□□ 12.9
ACTB-204ENST00000425660 CYTH4Q9UIA0 394 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 NME7Q9Y5B8 376 aa16.12■□□□□ 0.17
ACTB-204ENST00000425660 TARSL2A2RTX5 802 aaKnown RBP16.11■□□□□ 0.17
ACTB-204ENST00000425660 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
ACTB-204ENST00000425660 CEP104O60308 925 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 MICAL2O94851 1124 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
ACTB-204ENST00000425660 C2orf54Q08AI8 447 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 PTPN20Q4JDL3 420 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 C3orf20Q8ND61 904 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 KRT35Q92764 455 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 LPPQ93052 612 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 ADAM2Q99965 735 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 TRIM7Q9C029 511 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
ACTB-204ENST00000425660 UBN1Q9NPG3 1134 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
ACTB-204ENST00000425660 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 PCDHA3Q9Y5H8 950 aa16.11■□□□□ 0.17
ACTB-204ENST00000425660 INPPL1O15357 1258 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 PROSCO94903 275 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 HSPA1AP0DMV8 641 aaKnown RBP16.1■□□□□ 0.17
ACTB-204ENST00000425660 HSPA1BP0DMV9 641 aaKnown RBP16.1■□□□□ 0.17
ACTB-204ENST00000425660 GABRB2P47870 512 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 TAP1Q03518 808 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 WDR93Q6P2C0 686 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 ZNF598Q86UK7 904 aaKnown RBP16.1■□□□□ 0.17
ACTB-204ENST00000425660 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 TOP6BLQ8N6T0 577 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 OGDHLQ9ULD0 1010 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 SPOPO43791 374 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 MAN1A1P33908 653 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 LBX1P52954 281 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 CLUL1Q15846 466 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 APPL2Q8NEU8 664 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 PGBD4Q96DM1 585 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 PNKPQ96T60 521 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 RSAD1Q9HA92 442 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 RGS18Q9NS28 235 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 MIOSQ9NXC5 875 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 L1RE1Q9UN81 338 aa16.1■□□□□ 0.17
ACTB-204ENST00000425660 CCDC151A5D8V7 595 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 TMEM110-MUSTN1A8MSY1 372 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 M0QYV0 167 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 HSPA8P11142 646 aaKnown RBP16.09■□□□□ 0.17
ACTB-204ENST00000425660 RPL9P32969 192 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms