RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RNPEPL1Q9HAU8 725 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC38A10Q9HBR0 1119 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CYP26B1Q9NR63 512 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PSMC3IPQ9P2W1 217 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 TAF1LQ8IZX4 1826 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CNTNAP1P78357 1384 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MAGEB2O15479 319 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PRPF4O43172 522 aaKnown RBP eCLIP7.93□□□□□ -1.147e-17■□□□□ 10.4
SMARCC1-202ENST00000425518 CALB2P22676 271 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 RASSF2P50749 326 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 VCPP55072 806 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 OGDHQ02218 1023 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 NCOA4Q13772 614 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MORF4L2Q15014 288 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MAPK6Q16659 721 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 WDR72Q3MJ13 1102 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 SPDYE2Q495Y8 402 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PAXIP1Q6ZW49 1069 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PHF13Q86YI8 300 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CCDC60Q8IWA6 550 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC7A6OSQ96CW6 309 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 DEFB129Q9H1M3 183 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF277Q9NRM2 450 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 FBXO40Q9UH90 709 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM191CA6NGB0 347 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PEX11AO75192 247 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CST3P01034 146 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PSAPP07602 524 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 WEE2P0C1S8 567 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM191BP0C7N4 346 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CTCFP49711 727 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GPX6P59796 221 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 C1QBPQ07021 282 aaKnown RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 RNASEH2BQ5TBB1 312 aaKnown RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ANKRD22Q5VYY1 191 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 SCARA5Q6ZMJ2 495 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ZBTB33Q86T24 672 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TCP10LQ8TDR4 215 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 C10orf82Q8WW14 230 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 WNK4Q96J92 1243 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 IMPG2Q9BZV3 1241 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 C17orf75Q9HAS0 396 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 RNF146Q9NTX7 359 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 WDR46O15213 610 aaKnown RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 MMP8P22894 467 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PSEN1P49768 467 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GEMIN4P57678 1058 aaKnown RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CCDC6Q16204 474 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PARP6Q2NL67 630 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 MSS51Q4VC12 460 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PLEKHG4Q58EX7 1191 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 FNBP1LQ5T0N5 605 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 NAIF1Q69YI7 327 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 SUPT20HQ8NEM7 779 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 RFWD2Q8NHY2 731 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ACTL9Q8TC94 416 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 STK32AQ8WU08 396 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 RSAD2Q8WXG1 361 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 VCPIP1Q96JH7 1222 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 YIPF3Q9GZM5 350 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 HAPLN2Q9GZV7 340 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 DENND2DQ9H6A0 471 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GINM1Q9NU53 330 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CYP39A1Q9NYL5 469 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 SENP1Q9P0U3 644 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC17A7Q9P2U7 560 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 SCN9AQ15858 1988 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TYROBPO43914 113 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CST8O60676 142 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 APBA3O96018 575 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GLRA2P23416 452 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 CCND2P30279 289 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ABL2P42684 1182 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 NRLP54845 237 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GDF10P55107 478 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 MTMR2Q13614 643 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TFDP3Q5H9I0 405 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 STYK1Q6J9G0 422 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 GPAT2Q6NUI2 795 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 APBB1IPQ7Z5R6 666 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 VSIG10LQ86VR7 867 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 LRRC6Q86X45 466 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 TDRPQ86YL5 185 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 FBXO36Q8NEA4 188 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 ARHGAP28Q9P2N2 729 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 HEY2Q9UBP5 337 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 PCSK1NQ9UHG2 260 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 LTBP1Q14766 1721 aa7.92□□□□□ -1.14
SMARCC1-202ENST00000425518 hCG_1818297A0A087WSY0 165 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ENO4A6NNW6 628 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ONECUT3O60422 494 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TPBGLP0DKB5 382 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CD19P15391 556 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CCNHP51946 323 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ARL4CP56559 192 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ACTR2P61160 394 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms