RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 HEXIM1O94992 359 aaKnown RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 SOX4Q06945 474 aaPredicted RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 CNGA2Q16280 664 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 MAP9Q49MG5 647 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 SGO2Q562F6 1265 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 CYP4A22Q5TCH4 519 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 SEL1L2Q5TEA6 688 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 DNAJC24Q6P3W2 148 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 PLEKHA4Q9H4M7 779 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 OGFRQ9NZT2 677 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 TMEM191CA6NGB0 347 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 SART1O43290 800 aaKnown RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 ATF7P17544 494 aaPredicted RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 MAP2K2P36507 400 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 THPOP40225 353 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 RPL7AP62424 266 aaKnown RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 ADAT2Q7Z6V5 191 aaKnown RBP28.09■■■□□ 2.09
LDB1-202ENST00000425280 RNF180Q86T96 592 aa28.09■■■□□ 2.09
LDB1-202ENST00000425280 PPP1R15BQ5SWA1 713 aa28.08■■■□□ 2.09
LDB1-202ENST00000425280 PXYLP1Q8TE99 480 aa28.08■■■□□ 2.09
LDB1-202ENST00000425280 GDF3Q9NR23 364 aa28.08■■■□□ 2.09
LDB1-202ENST00000425280 CHST12Q9NRB3 414 aa28.08■■■□□ 2.09
LDB1-202ENST00000425280 KIAA1257Q9ULG3 409 aa28.08■■■□□ 2.09
LDB1-202ENST00000425280 CYP3A5P20815 502 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 TNFRSF8P28908 595 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 ITGA7Q13683 1181 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 DAB2IPQ5VWQ8 1189 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 C3orf20Q8ND61 904 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 OSBPL7Q9BZF2 842 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 AGO3Q9H9G7 860 aaKnown RBP28.07■■■□□ 2.08
LDB1-202ENST00000425280 GOLGA2P5Q9HBQ8 144 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 TJP2Q9UDY2 1190 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 STRIP2Q9ULQ0 834 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 ZSCAN5CA6NGD5 496 aaPredicted RBP28.07■■■□□ 2.08
LDB1-202ENST00000425280 M0QYV0 167 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 PTGESO14684 152 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 MAP2K7O14733 419 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 VEGFBP49765 207 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 GUCY2DQ02846 1103 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 FBXO47Q5MNV8 452 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 HDXQ7Z353 690 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.07■■■□□ 2.08
LDB1-202ENST00000425280 MCEEQ96PE7 176 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 SLITRK6Q9H5Y7 841 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 ERVK-5Q9HDB9 667 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 FAM105AQ9NUU6 356 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 IP6K2Q9UHH9 426 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 NME7Q9Y5B8 376 aa28.07■■■□□ 2.08
LDB1-202ENST00000425280 MAN1A1P33908 653 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 ACLYP53396 1101 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 SOWAHAQ2M3V2 549 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 DPH6Q7L8W6 267 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 IFT20Q8IY31 132 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 ZNF560Q96MR9 790 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 CPXM1Q96SM3 734 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 EPB41L5Q9HCM4 733 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 SPTLC1O15269 473 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 CABYRO75952 493 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 GNRH1P01148 92 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 ZFP42Q96MM3 310 aa28.06■■■□□ 2.08
LDB1-202ENST00000425280 DNAH12Q6ZR08 3092 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 HTTP42858 3142 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 MEIS3P2A8K0S8 358 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 GPR182O15218 404 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 GPD2P43304 727 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 TAP1Q03518 808 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 ZNF252P-AS1Q0IIN9 211 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 LCLAT1Q6UWP7 414 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 C12orf29Q8N999 325 aa28.05■■■□□ 2.08
LDB1-202ENST00000425280 AENQ8WTP8 325 aaKnown RBP28.05■■■□□ 2.08
LDB1-202ENST00000425280 DDX27Q96GQ7 796 aaKnown RBP28.05■■■□□ 2.08
LDB1-202ENST00000425280 TRMT13Q9NUP7 481 aaKnown RBP28.05■■■□□ 2.08
LDB1-202ENST00000425280 GOLGA6L10A0A0M3HER8 536 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 KPNA7A9QM74 516 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 HSPA6P17066 643 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 PNPLA4P41247 253 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 TAS2R40P59535 323 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 PTK7Q13308 1070 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 DCUN1D2Q6PH85 259 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 SLC13A5Q86YT5 568 aaPredicted RBP28.04■■■□□ 2.08
LDB1-202ENST00000425280 UBA3Q8TBC4 463 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 C18orf8Q96DM3 657 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 PPP1R10Q96QC0 940 aaKnown RBP28.04■■■□□ 2.08
LDB1-202ENST00000425280 GDAP2Q9NXN4 497 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 AMACRQ9UHK6 382 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 ESYT3A0FGR9 886 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 ERBB2P04626 1255 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 OGDHQ02218 1023 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 ACOT1Q86TX2 421 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 ZDHHC14Q8IZN3 488 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 TSPAN16Q9UKR8 245 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 USTQ9Y2C2 406 aa28.04■■■□□ 2.08
LDB1-202ENST00000425280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.04■■■□□ 2.08
LDB1-202ENST00000425280 PSTPIP1O43586 416 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 PLA2G4AP47712 749 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 TAF6P49848 677 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 PDCLQ13371 301 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 CASP8Q14790 479 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 XYLT1Q86Y38 959 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 RHOT1Q8IXI2 618 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms