RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TMLHEQ9NVH6 421 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 SIT1Q9Y3P8 196 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 SNX9Q9Y5X1 595 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 COL4A3Q01955 1670 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 RFX1P22670 979 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 MLF2Q15773 248 aaPredicted RBP23.16■■□□□ 1.3
CDCP1-202ENST00000425231 KNOP1Q1ED39 458 aaKnown RBP23.16■■□□□ 1.3
CDCP1-202ENST00000425231 HS2ST1Q7LGA3 356 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 WDR49Q8IV35 697 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 C12orf56Q8IXR9 622 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 DCP1BQ8IZD4 617 aaKnown RBP23.16■■□□□ 1.3
CDCP1-202ENST00000425231 TMEM86AQ8N2M4 240 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 XXYLT1Q8NBI6 393 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 ZSCAN18Q8TBC5 510 aaPredicted RBP23.16■■□□□ 1.3
CDCP1-202ENST00000425231 LPIN3Q9BQK8 851 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 ACBD6Q9BR61 282 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 DLGAP2Q9P1A6 1054 aa23.16■■□□□ 1.3
CDCP1-202ENST00000425231 USP34Q70CQ2 3546 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 FAM237AA0A1B0GTK4 181 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 HAPLN1P10915 354 aaPredicted RBP23.15■■□□□ 1.3
CDCP1-202ENST00000425231 CYP2J2P51589 502 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 PRKCQQ04759 706 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 STK4Q13043 487 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 ITIH5Q86UX2 942 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 TOP6BLQ8N6T0 577 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 FOXQ1Q9C009 403 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 DDX43Q9NXZ2 648 aaKnown RBP23.15■■□□□ 1.3
CDCP1-202ENST00000425231 ABI2Q9NYB9 513 aaPredicted RBP23.15■■□□□ 1.3
CDCP1-202ENST00000425231 CGNQ9P2M7 1197 aaKnown RBP23.15■■□□□ 1.3
CDCP1-202ENST00000425231 USP25Q9UHP3 1055 aa23.15■■□□□ 1.3
CDCP1-202ENST00000425231 GABRDO14764 452 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 TNNC2P02585 160 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 DCNP07585 359 aaKnown RBP23.14■■□□□ 1.29
CDCP1-202ENST00000425231 VIPR2P41587 438 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 TSPY1Q01534 308 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 CYP24A1Q07973 514 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 GRM2Q14416 872 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 PSMD6Q15008 389 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 SOWAHAQ2M3V2 549 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 KMT5BQ4FZB7 885 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 STXBP5Q5T5C0 1151 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 VITQ6UXI7 678 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 LIMS2Q7Z4I7 341 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 OSTM1Q86WC4 334 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 KIAA0895Q8NCT3 520 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 PJA1Q8NG27 643 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 SPATA18Q8TC71 538 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 HPDLQ96IR7 371 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 PKMYT1Q99640 499 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 MKNK1Q9BUB5 465 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 GZF1Q9H116 711 aaPredicted RBP23.14■■□□□ 1.29
CDCP1-202ENST00000425231 MYO15AQ9UKN7 3530 aa23.14■■□□□ 1.29
CDCP1-202ENST00000425231 NCANO14594 1321 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 KANSL1LA0AUZ9 987 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 CST3P01034 146 aaPredicted RBP23.13■■□□□ 1.29
CDCP1-202ENST00000425231 GABRR2P28476 465 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 MYO1EQ12965 1108 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 PSMD2Q13200 908 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 DPH6Q7L8W6 267 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 TRAPPC11Q7Z392 1133 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 TRMT61BQ9BVS5 477 aaKnown RBP23.13■■□□□ 1.29
CDCP1-202ENST00000425231 SLITRK6Q9H5Y7 841 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 IL21Q9HBE4 155 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 PCDHB5Q9Y5E4 795 aa23.13■■□□□ 1.29
CDCP1-202ENST00000425231 VPS13AQ96RL7 3174 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 LRRN2O75325 713 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 FGF19O95750 216 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 DLATP10515 647 aaKnown RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 GLULP15104 373 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 PSMC3P17980 439 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 ACAT1P24752 427 aaKnown RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 NDUFA8P51970 172 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 MYL7Q01449 175 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 VEPH1Q14D04 833 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 NFE2Q16621 373 aaPredicted RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 INTS6LQ5JSJ4 861 aaKnown RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 ADGRF2Q8IZF7 708 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 FAM200AQ8TCP9 573 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 GIPC2Q8TF65 315 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 ZNF516Q92618 1163 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 CCDC127Q96BQ5 260 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 CGRRF1Q99675 332 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 SCAND2PQ9GZW5 306 aaPredicted RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 ATXN3LQ9H3M9 355 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 EXOC1Q9NV70 894 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 GTF3C4Q9UKN8 822 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 R3HCC1Q9Y3T6 440 aaKnown RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 MTF2Q9Y483 593 aaPredicted RBP23.12■■□□□ 1.29
CDCP1-202ENST00000425231 ATP6V1DQ9Y5K8 247 aa23.12■■□□□ 1.29
CDCP1-202ENST00000425231 SHISA7A6NL88 538 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 HCRTO43612 131 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 MYL1P05976 194 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 TNNI1P19237 187 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 CD72P21854 359 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 SYKP43405 635 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 LHX1P48742 406 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 ANGPT1Q15389 498 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 MFSD6LQ8IWD5 586 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 KBTBD7Q8WVZ9 684 aa23.11■■□□□ 1.29
CDCP1-202ENST00000425231 DNASE1L2Q92874 299 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms