RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 CACNA1AO00555 2505 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 LDHAP00338 332 aaKnown RBP19.12■□□□□ 0.65
GPC1-203ENST00000425056 TDGF1P13385 188 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 CDC25CP30307 473 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
GPC1-203ENST00000425056 TSSK4Q6SA08 328 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 ERMP1Q7Z2K6 904 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 C1orf127Q8N9H9 656 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 FAM200AQ8TCP9 573 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 CSGALNACT1Q8TDX6 532 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 HINFPQ9BQA5 517 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 EPC1Q9H2F5 836 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 TASP1Q9H6P5 420 aa19.12■□□□□ 0.65
GPC1-203ENST00000425056 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
GPC1-203ENST00000425056 STX6O43752 255 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 PRAMEF12O95522 483 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 ITGB3P05106 788 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 HAPLN1P10915 354 aaPredicted RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 CHRNB1P11230 501 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 CCNE1P24864 410 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 POLR2BP30876 1174 aaKnown RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 CYP4F8P98187 520 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 TFAMQ00059 246 aaKnown RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 KIAA2013Q8IYS2 634 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 DCP1BQ8IZD4 617 aaKnown RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 SYCP3Q8IZU3 236 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 LRRC52Q8N7C0 313 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 CXorf38Q8TB03 319 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 LRRC3BQ96PB8 259 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 GCNAQ96QF7 691 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 CBWD1Q9BRT8 395 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 C8orf33Q9H7E9 229 aaPredicted RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 LMAN1LQ9HAT1 526 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 PANK4Q9NVE7 773 aa19.11■□□□□ 0.65
GPC1-203ENST00000425056 ABI2Q9NYB9 513 aaPredicted RBP19.11■□□□□ 0.65
GPC1-203ENST00000425056 SLC38A8A6NNN8 435 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
GPC1-203ENST00000425056 DPYSL4O14531 572 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 EXTL3O43909 919 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 CDR1P51861 262 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 TSPY1Q01534 308 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 ARHGAP29Q52LW3 1261 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 PDCL2Q8N4E4 241 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 DCLK2Q8N568 766 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 CACTINQ8WUQ7 758 aaKnown RBP19.1■□□□□ 0.65
GPC1-203ENST00000425056 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
GPC1-203ENST00000425056 PANK2Q9BZ23 570 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 TMEM206Q9H813 350 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 ZMYM5Q9UJ78 669 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 ITGA11Q9UKX5 1188 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 L1RE1Q9UN81 338 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 AGAP1Q9UPQ3 857 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 PCDHB5Q9Y5E4 795 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 CEP250Q9BV73 2442 aa19.1■□□□□ 0.65
GPC1-203ENST00000425056 MYBPHLA2RUH7 354 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 CTHP32929 405 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 CCR3P51677 355 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 PPP2R5DQ14738 602 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 GPIHBP1Q8IV16 184 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 CCDC65Q8IXS2 484 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 TMEM86AQ8N2M4 240 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 PDILTQ8N807 584 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 LINC00301Q8NCQ3 95 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 BPIFB1Q8TDL5 484 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 GIPC2Q8TF65 315 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 RMDN1Q96DB5 314 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 BACH2Q9BYV9 841 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 TMLHEQ9NVH6 421 aa19.09■□□□□ 0.65
GPC1-203ENST00000425056 SMG5Q9UPR3 1016 aaKnown RBP19.09■□□□□ 0.65
GPC1-203ENST00000425056 DNAH14Q0VDD8 3507 aa19.08■□□□□ 0.65
GPC1-203ENST00000425056 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 SPECC1L-ADORA2AF8WAN1 911 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 KIAA0391O15091 583 aaKnown RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 PRPF6O94906 941 aaKnown RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 HMGA1P17096 107 aaKnown RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 SOX9P48436 509 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 KPNA1P52294 538 aaPredicted RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 NRLP54845 237 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 PLCB2Q00722 1185 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 LRRC32Q14392 662 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 GAS6Q14393 721 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 STK38Q15208 465 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 E2F4Q16254 413 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 TAF12Q16514 161 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 WDR44Q5JSH3 913 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 TXNDC11Q6PKC3 985 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 TMEM150AQ86TG1 271 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 RALGPS2Q86X27 583 aaPredicted RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 GPD1LQ8N335 351 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 SPATA18Q8TC71 538 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 ZFYVE19Q96K21 471 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 FAM84AQ96KN4 292 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 ACBD6Q9BR61 282 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 MTMR12Q9C0I1 747 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 PDE11AQ9HCR9 933 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 ABCB6Q9NP58 842 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms