RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 TNIP2Q8NFZ5 429 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 ZNF512BQ96KM6 892 aaPredicted RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 ZNF197O14709 1029 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 STRNO43815 780 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 FDPSP14324 419 aaKnown RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 TPI1P60174 286 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 ERVK-24P63145 666 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 NUP93Q8N1F7 819 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 SH3TC2Q8TF17 1288 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 TNIP3Q96KP6 325 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 BRD2P25440 801 aaKnown RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 SLC13A5Q86YT5 568 aaPredicted RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 MCEEQ96PE7 176 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 NR1H4Q96RI1 486 aaPredicted RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 ADAM33Q9BZ11 813 aa14.43□□□□□ -0.1
SREBF2-202ENST00000424354 FRMD8P1Q9BZ68 369 aaPredicted RBP14.43□□□□□ -0.1
SREBF2-202ENST00000424354 COPB2P35606 906 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 EFL1Q7Z2Z2 1120 aaKnown RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 RBBP8NLQ8NC74 664 aaPredicted RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 PLEKHA5Q9HAU0 1116 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 VCAM1P19320 739 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 KLK7P49862 253 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 NUP107P57740 925 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 KBTBD12Q3ZCT8 623 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 FIGNQ5HY92 759 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 TTC33Q6PID6 262 aaPredicted RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 NLRP9Q7RTR0 991 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 ARHGEF38Q9NXL2 777 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 TRPC5OSA6NMA1 111 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 BNIP3LO60238 219 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 PDE5AO76074 875 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 APOA4P06727 396 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 POLBP06746 335 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 PDGFRAP16234 1089 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 SCARF1Q14162 830 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 APOBEC3FQ8IUX4 373 aaKnown RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 NDFIP2Q9NV92 336 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 SNRNP35Q16560 246 aaKnown RBP14.42□□□□□ -0.1
SREBF2-202ENST00000424354 TTC23LQ6PF05 361 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 PTPRN2Q92932 1015 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 CNBD2Q96M20 576 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 ZSWIM1Q9BR11 485 aa14.42□□□□□ -0.1
SREBF2-202ENST00000424354 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.17e-7■■□□□ 12.1
SREBF2-202ENST00000424354 NPEPPSP55786 919 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 SMAD1Q15797 465 aaKnown RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 TRIM16LQ309B1 348 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 RNF219Q5W0B1 726 aaPredicted RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 TAS2R42Q7RTR8 314 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 SCN4BQ8IWT1 228 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 MAP3K14Q99558 947 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ZNF556Q9HAH1 456 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 DFFAO00273 331 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 PLOD1Q02809 727 aaPredicted RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 GRIN1Q05586 938 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ZNF235Q14590 738 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 CALML6Q8TD86 181 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 KAZALD1Q96I82 304 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ELMO2Q96JJ3 720 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 WHRNQ9P202 907 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 H2AFYO75367 372 aaKnown RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 CTDNEP1O95476 244 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 RARGP13631 454 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 CLK1P49759 484 aaKnown RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 DEPDC1Q5TB30 811 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 GPR141Q7Z602 305 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 RGL1Q9NZL6 768 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 MPP6Q9NZW5 540 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 DGAT1O75907 488 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 MYBP10242 640 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 SULT1E1P49888 294 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ANTXR2P58335 489 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 STX5Q13190 355 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 TRIM69Q86WT6 500 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ACTRT1Q8TDG2 376 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 TMEM8AQ9HCN3 771 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 PEAK1Q9H792 1746 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 TLR2O60603 784 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ALBP02768 609 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 CALB2P22676 271 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 KRR1Q13601 381 aaKnown RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
SREBF2-202ENST00000424354 CAAP1Q9H8G2 361 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 GTF3C4Q9UKN8 822 aa14.41□□□□□ -0.1
SREBF2-202ENST00000424354 ABCA3Q99758 1704 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 GOLGA8TH3BQL2 631 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 ECE2O60344 883 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 SSTR3P32745 418 aaPredicted RBP14.4□□□□□ -0.1
SREBF2-202ENST00000424354 BTKQ06187 659 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 CNDP1Q96KN2 507 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 HEY2Q9UBP5 337 aa14.4□□□□□ -0.1
SREBF2-202ENST00000424354 FAM32AQ9Y421 112 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms