RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 FAM160B1Q5W0V3 765 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 SLC30A10Q6XR72 485 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 SARAFQ96BY9 339 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 AIFM3Q96NN9 605 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 NELL2Q99435 816 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 MAP3K14Q99558 947 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 SPATA5L1Q9BVQ7 753 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 SLAMF7Q9NQ25 335 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 PCDHA1Q9Y5I3 950 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 RAD54BQ9Y620 910 aa5.18□□□□□ -1.58
LINC00397-201ENST00000422074 A0A088AWK7 358 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 GCOM1H8Y6P7 765 aaPredicted RBP5.17□□□□□ -1.58
LINC00397-201ENST00000422074 RBMXL2O75526 392 aaKnown RBP5.17□□□□□ -1.58
LINC00397-201ENST00000422074 DNAJB5O75953 348 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 GNAI2P04899 355 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 ITGALP20701 1170 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 IGBP1P78318 339 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 BOP1Q14137 746 aaKnown RBP5.17□□□□□ -1.58
LINC00397-201ENST00000422074 DTX2Q86UW9 622 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 BRIX1Q8TDN6 353 aaKnown RBP5.17□□□□□ -1.58
LINC00397-201ENST00000422074 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 RSAD1Q9HA92 442 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 ADARB2Q9NS39 739 aaKnown RBP5.17□□□□□ -1.58
LINC00397-201ENST00000422074 HESX1Q9UBX0 185 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 STXBP5LQ9Y2K9 1186 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 NR2E3Q9Y5X4 410 aa5.17□□□□□ -1.58
LINC00397-201ENST00000422074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 LINC00473A8K010 186 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 H3BML4 177 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 H3BUI4 141 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 AKAP10O43572 662 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 OFD1O75665 1012 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 RFPL1O75677 317 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 CHRM2P08172 466 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 ZNF37AP17032 561 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 GCLCP48506 637 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 RBM20Q5T481 1227 aaKnown RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 SFRP4Q6FHJ7 346 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 B3GNT9Q6UX72 402 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 ARHGEF25Q86VW2 580 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 PLBD2Q8NHP8 589 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 DIS3LQ8TF46 1054 aaKnown RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 FBXO41Q8TF61 875 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 FAM136AQ96C01 138 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 CGRRF1Q99675 332 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-201ENST00000422074 IL17RBQ9NRM6 502 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 SERTAD4Q9NUC0 356 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 ASB6Q9NWX5 421 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 EHD3Q9NZN3 535 aa5.16□□□□□ -1.58
LINC00397-201ENST00000422074 DCLK1O15075 740 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 URI1O94763 535 aaPredicted RBP5.15□□□□□ -1.59
LINC00397-201ENST00000422074 HDCP19113 662 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 PCSK6P29122 969 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 EPHB1P54762 984 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 PROK1P58294 105 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 EXOSC9Q06265 439 aaKnown RBP5.15□□□□□ -1.59
LINC00397-201ENST00000422074 GTF2H3Q13889 308 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 SH2D3CQ8N5H7 860 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 KLHDC4Q8TBB5 520 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 SLC35G2Q8TBE7 412 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 ZNF384Q8TF68 577 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 ANKS1AQ92625 1134 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 FKBP10Q96AY3 582 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 ACTRT3Q9BYD9 372 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 TPSD1Q9BZJ3 242 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 CDH19Q9H159 772 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 FRMD4BQ9Y2L6 1034 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 PLEKHM1Q9Y4G2 1056 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 TNFRSF18Q9Y5U5 241 aa5.15□□□□□ -1.59
LINC00397-201ENST00000422074 M0QYG6 137 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 VPS4BO75351 444 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 RHOP08100 348 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 CHRM3P20309 590 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 GPD1P21695 349 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 CD6P30203 668 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 RAB27AP51159 221 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 SOX8P57073 446 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 FOXF2Q12947 444 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 BMPR2Q13873 1038 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 LONRF3Q496Y0 759 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 AKNAD1Q5T1N1 836 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 IFIT1BQ5T764 474 aaKnown RBP5.14□□□□□ -1.59
LINC00397-201ENST00000422074 VPS53Q5VIR6 699 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 ZNF788Q6ZQV5 615 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 GRAMD1CQ8IYS0 662 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 FAM46DQ8NEK8 389 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 JPH3Q8WXH2 748 aaPredicted RBP5.14□□□□□ -1.59
LINC00397-201ENST00000422074 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
LINC00397-201ENST00000422074 MRGPRX1Q96LB2 322 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 GABBR1Q9UBS5 961 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 ADAM21Q9UKJ8 722 aa5.14□□□□□ -1.59
LINC00397-201ENST00000422074 WIPF3A6NGB9 483 aa5.13□□□□□ -1.59
LINC00397-201ENST00000422074 AP1G1O43747 822 aa5.13□□□□□ -1.59
LINC00397-201ENST00000422074 THP07101 528 aa5.13□□□□□ -1.59
LINC00397-201ENST00000422074 ATXN1LP0C7T5 689 aaKnown RBP5.13□□□□□ -1.59
LINC00397-201ENST00000422074 ZFXP17010 805 aaPredicted RBP5.13□□□□□ -1.59
LINC00397-201ENST00000422074 NCLP19338 710 aaKnown RBP5.13□□□□□ -1.59
LINC00397-201ENST00000422074 PPIFP30405 207 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms