RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 GLRA4Q5JXX5 417 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 FBXO47Q5MNV8 452 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 RAET1EQ8TD07 263 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 HDAC7Q8WUI4 952 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 TSEN34Q9BSV6 310 aaKnown RBP20■□□□□ 0.79
RBFOX1-204ENST00000422070 RNF39Q9H2S5 420 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 GDF3Q9NR23 364 aa20■□□□□ 0.79
RBFOX1-204ENST00000422070 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20■□□□□ 0.79
RBFOX1-204ENST00000422070 MOXD2PA6NHM9 499 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 MAP2K7O14733 419 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 ARHGEF6Q15052 776 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 PTGISQ16647 500 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 DNAJC24Q6P3W2 148 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 LCLAT1Q6UWP7 414 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 LIMS2Q7Z4I7 341 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 IFT20Q8IY31 132 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 APOL6Q9BWW8 343 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 TRIM7Q9C029 511 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 FAM105AQ9NUU6 356 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 OGFRQ9NZT2 677 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 SNX9Q9Y5X1 595 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 SQORQ9Y6N5 450 aa19.99■□□□□ 0.79
RBFOX1-204ENST00000422070 BHMG1C9JSJ3 638 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 PPEF2O14830 753 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 SART1O43290 800 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 CAPN15O75808 1086 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 MICAL2O94851 1124 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 GABRB2P47870 512 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 PTPN20Q4JDL3 420 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 FAM26DQ5JW98 314 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 LLGL2Q6P1M3 1020 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 HDXQ7Z353 690 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 NIPA2Q8N8Q9 360 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 SLAIN1Q8ND83 568 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 PKNOX2Q96KN3 472 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 ERVK-5Q9HDB9 667 aa19.98■□□□□ 0.79
RBFOX1-204ENST00000422070 RAD51CO43502 376 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 HEXIM1O94992 359 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 FAM163BP0C2L3 166 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 GPD2P43304 727 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 ACLYP53396 1101 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 ZNF211Q13398 564 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 RHOT1Q8IXI2 618 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 ARRDC4Q8NCT1 418 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 CCDC26Q8TAB7 109 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 FNIP1Q8TF40 1166 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 HEXIM2Q96MH2 286 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 PPP1R10Q96QC0 940 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 AP1M1Q9BXS5 423 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 MIS12Q9H081 205 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 SLC38A7Q9NVC3 462 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 SCN1AP35498 2009 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 PTGESO14684 152 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 PYGMP11217 842 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 TAF6P49848 677 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 RAB27AP51159 221 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 ZNF268Q14587 947 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 TRIM71Q2Q1W2 868 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 SV2CQ496J9 727 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 MAATS1Q7Z4T9 603 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 CPNE8Q86YQ8 564 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 KLHL7Q8IXQ5 586 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 AENQ8WTP8 325 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 C18orf8Q96DM3 657 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 DNAI2Q9GZS0 605 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 KLK14Q9P0G3 267 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 CYTH4Q9UIA0 394 aa19.97■□□□□ 0.79
RBFOX1-204ENST00000422070 SIGLEC16A6NMB1 481 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 KPNA7A9QM74 516 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 ZNF623O75123 536 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SASH3O75995 380 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 GLI1P08151 1106 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 CTSHP09668 335 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SETSIPP0DME0 302 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 ITGA4P13612 1032 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 THPOP40225 353 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SLC7A5Q01650 507 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 PDCLQ13371 301 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 PIGHQ14442 188 aaPredicted RBP19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 CYP1B1Q16678 543 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SOWAHAQ2M3V2 549 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 LRRC38Q5VT99 294 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 DPH6Q7L8W6 267 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 MRPL10Q7Z7H8 261 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SLC13A5Q86YT5 568 aaPredicted RBP19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 DDX27Q96GQ7 796 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 MRPL45Q9BRJ2 306 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 SAGE1Q9NXZ1 904 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 GIT1Q9Y2X7 761 aa19.96■□□□□ 0.79
RBFOX1-204ENST00000422070 M0QYV0 167 aa19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 ZMYND10O75800 440 aa19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 EPHB4P54760 987 aa19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 SOX4Q06945 474 aaPredicted RBP19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 NFX1Q12986 1120 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 ARHGAP17Q68EM7 881 aa19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 EMBQ6PCB8 327 aa19.95■□□□□ 0.78
RBFOX1-204ENST00000422070 KATNAL2Q8IYT4 538 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms