RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 N4BP2L1Q5TBK1 243 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-203ENST00000420503 WSCD1Q658N2 575 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 MCTP1Q6DN14 999 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 WDR5BQ86VZ2 330 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 GPBP1Q86WP2 473 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-203ENST00000420503 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 MSTO1Q9BUK6 570 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 TIPINQ9BVW5 301 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 TASP1Q9H6P5 420 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 GKN1Q9NS71 199 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 DCLK1O15075 740 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 LRP3O75074 770 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 TADA3O75528 432 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 PIGRP01833 764 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 ODC1P11926 461 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
LINC00339-203ENST00000420503 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 USP13Q92995 863 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-203ENST00000420503 HHIPQ96QV1 700 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 FAM83CQ9BQN1 747 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
LINC00339-203ENST00000420503 ZHX3Q9H4I2 956 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 ABI2Q9NYB9 513 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-203ENST00000420503 STK24Q9Y6E0 443 aa13.94□□□□□ -0.18
LINC00339-203ENST00000420503 LAD1O00515 517 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 CYB561D2O14569 222 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 TM4SF5O14894 197 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 RNF40O75150 1001 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
LINC00339-203ENST00000420503 CYP11A1P05108 521 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-203ENST00000420503 MCM2P49736 904 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-203ENST00000420503 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
LINC00339-203ENST00000420503 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 AASDHQ4L235 1098 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-203ENST00000420503 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 TMEM196Q5HYL7 178 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 ARMCX5Q6P1M9 558 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 CMTM8Q8IZV2 173 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 ASB3Q9Y575 518 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 LAMA1P25391 3075 aa13.93□□□□□ -0.18
LINC00339-203ENST00000420503 IGF2RP11717 2491 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 KIAA1549LQ6ZVL6 1849 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 RPP40O75818 363 aaKnown RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 FAM13AO94988 1023 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 F11P03951 625 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 PLCG1P19174 1290 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 ZNF131P52739 623 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 NLRP12P59046 1061 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 CRELD2Q6UXH1 353 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 GAB3Q8WWW8 586 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 ZSCAN31Q96LW9 406 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 SH2B1Q9NRF2 756 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 OBP2AQ9NY56 170 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 MAGED2Q9UNF1 606 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-203ENST00000420503 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
LINC00339-203ENST00000420503 TRAK2O60296 914 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 EPN2O95208 641 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 ACAT1P24752 427 aaKnown RBP13.91□□□□□ -0.18
LINC00339-203ENST00000420503 PMLP29590 882 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 HOXA6P31267 233 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 CNR2P34972 360 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 KCNA1Q09470 495 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 RUNX3Q13761 415 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 USP49Q70CQ1 688 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 ITIH5Q86UX2 942 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 OSTM1Q86WC4 334 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 PI4K2AQ9BTU6 479 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-203ENST00000420503 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 ANAPC1Q9H1A4 1944 aa13.91□□□□□ -0.18
LINC00339-203ENST00000420503 GIPC1O14908 333 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
LINC00339-203ENST00000420503 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 CDC25CP30307 473 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 ADSSP30520 456 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 GALK1P51570 392 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 VEPH1Q14D04 833 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 DDR2Q16832 855 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms