RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FAM193BQ96PV7 902 aaPredicted RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 MRPL45Q9BRJ2 306 aaKnown RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 PAAF1Q9BRP4 392 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 DESI2Q9BSY9 194 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 OXCT2Q9BYC2 517 aaPredicted RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 INPP5FQ9Y2H2 1132 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 CASTOR2A6NHX0 329 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 SYN3O14994 580 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 MMEP08473 750 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 TMEM253P0C7T8 217 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ODC1P11926 461 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 HADHBP55084 474 aaKnown RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 CYP27A1Q02318 531 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 KIF5AQ12840 1032 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ELAVL2Q12926 359 aaKnown RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 TIGD5Q53EQ6 642 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 CCDC122Q5T0U0 273 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 RASIP1Q5U651 963 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ACAD10Q6JQN1 1059 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 SCARA5Q6ZMJ2 495 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ADGRF2Q8IZF7 708 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 TWNKQ96RR1 684 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ZSWIM1Q9BR11 485 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 ACBD6Q9BR61 282 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 COLEC11Q9BWP8 271 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 STK39Q9UEW8 545 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
SHMT1P1-201ENST00000419974 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 MICAL3Q7RTP6 2002 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 SCN1AP35498 2009 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 TMEM265A0A087WTH1 108 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 USP27XA6NNY8 438 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 O00370 1275 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 B4GALT3O60512 393 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 OAZ2O95190 189 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 KIF4AO95239 1232 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 FGBP02675 491 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 GALTP07902 379 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 MYBL1P10243 752 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 NOMO3P69849 1222 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 HTRA4P83105 476 aaPredicted RBP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 PKDCCQ504Y2 493 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 TMEM240Q5SV17 173 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 DSTYKQ6XUX3 929 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 Q7L0L9 218 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 GPR65Q8IYL9 337 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 STK32AQ8WU08 396 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 TFAP2BQ92481 460 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 TRIM11Q96F44 468 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 SNX25Q9H3E2 840 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 ACP6Q9NPH0 428 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 CDH9Q9ULB4 789 aa15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHMT1P1-201ENST00000419974 RCCD1A6NED2 376 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 A8MXQ7 604 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 NRP1O14786 923 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 THAP12O43422 761 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 MTA2O94776 668 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 FTLP02792 175 aaPredicted RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 SETSIPP0DME0 302 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 PCSK1P29120 753 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 C1QBPQ07021 282 aaKnown RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 ARHGAP29Q52LW3 1261 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 WSCD1Q658N2 575 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 KIAA1328Q86T90 577 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 TMEM35BQ8NCS4 154 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 OR6B3Q8NGW1 331 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 LACRTQ9GZZ8 138 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 CWH43Q9H720 699 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 CYLDQ9NQC7 956 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 AVENQ9NQS1 362 aaPredicted RBP15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 HMGXB4Q9UGU5 601 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 CEP83Q9Y592 693 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 NME7Q9Y5B8 376 aa15.15■□□□□ 0.02
SHMT1P1-201ENST00000419974 TBKBP1A7MCY6 615 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 CLSTN1O94985 981 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 MMP8P22894 467 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 GPD2P43304 727 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 GALCP54803 685 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms