RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 PRMT6Q96LA8 375 aaPredicted RBP6.56□□□□□ -1.36
VPS45-203ENST00000419023 SLC2A13Q96QE2 648 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 SMAD5Q99717 465 aaKnown RBP6.56□□□□□ -1.36
VPS45-203ENST00000419023 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 GREM2Q9H772 168 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 MSL2Q9HCI7 577 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 IL23AQ9NPF7 189 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 SMPD4Q9NXE4 827 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 PLA2G3Q9NZ20 509 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 STAP2Q9UGK3 403 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 STXBP5LQ9Y2K9 1186 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 A0A0C4DFX4 3053 aa6.56□□□□□ -1.36
VPS45-203ENST00000419023 RANBP2P49792 3224 aaKnown RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 ANKRD18BA2A2Z9 1011 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 TCP10L2B9ZVM9 353 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 BTBD19C9JJ37 291 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 SGPL1O95470 568 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 MSX2P35548 267 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 WDR43Q15061 677 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS45-203ENST00000419023 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 CMTM4Q8IZR5 234 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 GLB1L3Q8NCI6 653 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 C1orf162Q8NEQ5 155 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 ACE2Q9BYF1 805 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 ARHGAP39Q9C0H5 1083 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 CD248Q9HCU0 757 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 TLR9Q9NR96 1032 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 MKS1Q9NXB0 559 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 ZNF70Q9UC06 446 aaPredicted RBP6.55□□□□□ -1.36
VPS45-203ENST00000419023 CPA4Q9UI42 421 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 GPR45Q9Y5Y3 372 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 SLC30A1Q9Y6M5 507 aa6.55□□□□□ -1.36
VPS45-203ENST00000419023 CEP290O15078 2479 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 BRCA2P51587 3418 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 TRIM75PA6NK02 468 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 B8ZZF3 427 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 MTSS1O43312 755 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 PLIN1O60240 522 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 CFBP00751 764 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 AGXTP21549 392 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 CTSSP25774 331 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 MEF2AQ02078 507 aaPredicted RBP6.54□□□□□ -1.36
VPS45-203ENST00000419023 CHRNDQ07001 517 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 FOXL1Q12952 345 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 IFIT5Q13325 482 aaKnown RBP6.54□□□□□ -1.36
VPS45-203ENST00000419023 PPIL2Q13356 520 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 ADRM1Q16186 407 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 ZNF585AQ6P3V2 769 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 UBE3BQ7Z3V4 1068 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 POLNQ7Z5Q5 900 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 CCDC146Q8IYE0 955 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 FATE1Q969F0 183 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 FAXDC2Q96IV6 333 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 WWC2-AS2Q96NR7 200 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 PARK7Q99497 189 aaKnown RBP6.54□□□□□ -1.36
VPS45-203ENST00000419023 TCF25Q9BQ70 676 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 PRO3102Q9H379 93 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 TDRD3Q9H7E2 651 aaKnown RBP6.54□□□□□ -1.36
VPS45-203ENST00000419023 MAP3K2Q9Y2U5 619 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 PSME4Q14997 1843 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 DLG5Q8TDM6 1919 aa6.54□□□□□ -1.36
VPS45-203ENST00000419023 SZT2Q5T011 3432 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 CCDC194A0A1B0GVG4 234 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 PDHXO00330 501 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 PEX14O75381 377 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 IL1R1P14778 569 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 CASRP41180 1078 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 SLC5A3P53794 718 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 NPEPPSP55786 919 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 GNAI1P63096 354 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 PPATQ06203 517 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 EFEMP1Q12805 493 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 ACAP2Q15057 778 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 PCBP2Q15366 365 aaKnown RBP eCLIP6.53□□□□□ -1.369e-7■■■■□ 24.1
VPS45-203ENST00000419023 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 MBNL2Q5VZF2 373 aaKnown RBP6.53□□□□□ -1.36
VPS45-203ENST00000419023 FAM111BQ6SJ93 734 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 C17orf99Q6UX52 265 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 BTNL9Q6UXG8 535 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 KSR2Q6VAB6 950 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 C15orf52Q6ZUT6 534 aaKnown RBP6.53□□□□□ -1.36
VPS45-203ENST00000419023 PRRT2Q7Z6L0 340 aaPredicted RBP6.53□□□□□ -1.36
VPS45-203ENST00000419023 ANKRD23Q86SG2 305 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 CERS5Q8N5B7 392 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 TTC9BQ8N6N2 239 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS45-203ENST00000419023 MORC4Q8TE76 937 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 SNX33Q8WV41 574 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 RIN2Q8WYP3 895 aaPredicted RBP6.53□□□□□ -1.36
VPS45-203ENST00000419023 COA7Q96BR5 231 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 RUNDC1Q96C34 613 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 FUBP3Q96I24 572 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS45-203ENST00000419023 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
VPS45-203ENST00000419023 DEFB118Q96PH6 123 aa6.53□□□□□ -1.36
VPS45-203ENST00000419023 PCDHGA2Q9Y5H1 932 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms