RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TMEM191CA6NGB0 347 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 O00370 1275 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 CAND2O75155 1236 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
SSBP3-205ENST00000417664 CHRNA1P02708 482 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 FAM163BP0C2L3 166 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 PTK7Q13308 1070 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 PTGISQ16647 500 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 DENND1BQ6P3S1 775 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 LCLAT1Q6UWP7 414 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 HDAC7Q8WUI4 952 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 MAIP1Q8WWC4 291 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-205ENST00000417664 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 TWNKQ96RR1 684 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 TSEN34Q9BSV6 310 aaKnown RBP17.79■□□□□ 0.44
SSBP3-205ENST00000417664 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 AP1M1Q9BXS5 423 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 MTUS1Q9ULD2 1270 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
SSBP3-205ENST00000417664 LRPAP1P30533 357 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 SSTR3P32745 418 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-205ENST00000417664 GABRB2P47870 512 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 PIGHQ14442 188 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-205ENST00000417664 ZNF268Q14587 947 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-205ENST00000417664 SV2CQ496J9 727 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 C2CD6Q53TS8 623 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 GLRA4Q5JXX5 417 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 PPP1R15BQ5SWA1 713 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 RHOT1Q8IXI2 618 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 KLHL7Q8IXQ5 586 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 FNIP1Q8TF40 1166 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 VIPAS39Q9H9C1 493 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 HMGXB4Q9UGU5 601 aa17.78■□□□□ 0.44
SSBP3-205ENST00000417664 RAD51CO43502 376 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 MICAL2O94851 1124 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 PYGMP11217 842 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 MARCKSL1P49006 195 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 TAF6P49848 677 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 RAB27AP51159 221 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 EPHB4P54760 987 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 SLC7A5Q01650 507 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 ZNF211Q13398 564 aaPredicted RBP17.77■□□□□ 0.44
SSBP3-205ENST00000417664 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 LRRC38Q5VT99 294 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 EMBQ6PCB8 327 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 DPH6Q7L8W6 267 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 KRT222Q8N1A0 295 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 TRIM7Q9C029 511 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
SSBP3-205ENST00000417664 THSD7BQ9C0I4 1608 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SIGLEC16A6NMB1 481 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 KPNA7A9QM74 516 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 GLI1P08151 1106 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SETSIPP0DME0 302 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 CHRNA3P32297 505 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 GPD2P43304 727 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SNX16P57768 344 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 NFX1Q12986 1120 aaKnown RBP17.77■□□□□ 0.43
SSBP3-205ENST00000417664 PAK2Q13177 524 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 CUL1Q13616 776 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 DHX34Q14147 1143 aaKnown RBP17.77■□□□□ 0.43
SSBP3-205ENST00000417664 PTPN20Q4JDL3 420 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 FAM26DQ5JW98 314 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 LIMS2Q7Z4I7 341 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SLC13A5Q86YT5 568 aaPredicted RBP17.77■□□□□ 0.43
SSBP3-205ENST00000417664 TMEM130Q8N3G9 435 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 AENQ8WTP8 325 aaKnown RBP17.77■□□□□ 0.43
SSBP3-205ENST00000417664 ACBD3Q9H3P7 528 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 GIT1Q9Y2X7 761 aa17.77■□□□□ 0.43
SSBP3-205ENST00000417664 SCN1AP35498 2009 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 M0QYV0 167 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 ZNF623O75123 536 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 ZMYND10O75800 440 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 ITGA4P13612 1032 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 THPOP40225 353 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 ACLYP53396 1101 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 GUCY2DQ02846 1103 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 GPS2Q13227 327 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 NNTQ13423 1086 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 KATNAL2Q8IYT4 538 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
SSBP3-205ENST00000417664 WNT8BQ93098 351 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 DDX27Q96GQ7 796 aaKnown RBP17.76■□□□□ 0.43
SSBP3-205ENST00000417664 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
SSBP3-205ENST00000417664 DDX47Q9H0S4 455 aaKnown RBP17.76■□□□□ 0.43
SSBP3-205ENST00000417664 SYNCQ9H7C4 482 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 EPB41L5Q9HCM4 733 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 ERVK-5Q9HDB9 667 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms