RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 DERAQ9Y315 318 aa17.69■□□□□ 0.42
PRPF18-203ENST00000417658 A0A0B4J269 797 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 PPEF2O14830 753 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 HNRNPDLO14979 420 aaKnown RBP17.68■□□□□ 0.42
PRPF18-203ENST00000417658 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 ATF6P18850 670 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 KCNA4P22459 653 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 CYP4F8P98187 520 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 RUNX3Q13761 415 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 ZRSR1Q15695 479 aaKnown RBP17.68■□□□□ 0.42
PRPF18-203ENST00000417658 TAF12Q16514 161 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 MGAT5BQ3V5L5 792 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 SLC39A12Q504Y0 691 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 FSTL4Q6MZW2 842 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 PNMA5Q96PV4 448 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 SEPT5Q99719 369 aaPredicted RBP17.68■□□□□ 0.42
PRPF18-203ENST00000417658 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
PRPF18-203ENST00000417658 RXFP3Q9NSD7 469 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
PRPF18-203ENST00000417658 DDX6P26196 483 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRPF18-203ENST00000417658 AVPR1AP37288 418 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 PXNP49023 591 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-203ENST00000417658 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 JADE1Q6IE81 842 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 METTL23Q86XA0 190 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 THEM5Q8N1Q8 247 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 SPPL2BQ8TCT7 592 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 HPS4Q9NQG7 708 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 SH2B1Q9NRF2 756 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-203ENST00000417658 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 CPSF3Q9UKF6 684 aaKnown RBP17.67■□□□□ 0.42
PRPF18-203ENST00000417658 ZFHX4Q86UP3 3567 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 CACNA1GO43497 2377 aa17.67■□□□□ 0.42
PRPF18-203ENST00000417658 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-203ENST00000417658 OTOL1A6NHN0 477 aaPredicted RBP17.66■□□□□ 0.42
PRPF18-203ENST00000417658 DRD1P21728 446 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 ATP2C1P98194 919 aaPredicted RBP17.66■□□□□ 0.42
PRPF18-203ENST00000417658 CCDC6Q16204 474 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 FBXO43Q4G163 708 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 TMEM150AQ86TG1 271 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 USP13Q92995 863 aaPredicted RBP17.66■□□□□ 0.42
PRPF18-203ENST00000417658 EXOC4Q96A65 974 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 CHFRQ96EP1 664 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 CDK5RAP3Q96JB5 506 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 SMG9Q9H0W8 520 aaKnown RBP17.66■□□□□ 0.42
PRPF18-203ENST00000417658 EBF3Q9H4W6 596 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 ASB7Q9H672 318 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 KIF9Q9HAQ2 790 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 TDP1Q9NUW8 608 aa17.66■□□□□ 0.42
PRPF18-203ENST00000417658 NPHP3-ACAD11A0A0J9YXS1 232 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 CYB561D2O14569 222 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 SLC26A4O43511 780 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 KCNK5O95279 499 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 F11P03951 625 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 HAPLN1P10915 354 aaPredicted RBP17.65■□□□□ 0.42
PRPF18-203ENST00000417658 ABCD1P33897 745 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 MPLP40238 635 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 NLRP12P59046 1061 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 BFSP1Q12934 665 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 TMEM132DQ14C87 1099 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 TMEM119Q4V9L6 283 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 LRRTM3Q86VH5 581 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 GIPC2Q8TF65 315 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 PLIN2Q99541 437 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 MSTO1Q9BUK6 570 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 CCSER1Q9C0I3 900 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 ATG2BQ96BY7 2078 aa17.65■□□□□ 0.42
PRPF18-203ENST00000417658 RNF40O75150 1001 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 NFICP08651 508 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 HMGA1P17096 107 aaKnown RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 GALK1P51570 392 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 ZNF131P52739 623 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 POU5F1Q01860 360 aaKnown RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 ZNF268Q14587 947 aaPredicted RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 PDGFRLQ15198 375 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 PLK5Q496M5 336 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 ARL6IP4Q66PJ3 421 aaKnown RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 CC2D1AQ6P1N0 951 aaPredicted RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 SYT13Q7L8C5 426 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 MON1AQ86VX9 555 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 DCP1BQ8IZD4 617 aaKnown RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 MAB21L3Q8N8X9 362 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 FBRSL1Q9HCM7 1045 aaKnown RBP17.64■□□□□ 0.41
PRPF18-203ENST00000417658 EBF1Q9UH73 591 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 CCL26Q9Y258 94 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 CEP295Q9C0D2 2601 aa17.64■□□□□ 0.41
PRPF18-203ENST00000417658 DENND4CQ5VZ89 1909 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 TRAK2O60296 914 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 RHOBTB1O94844 696 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 EGFP01133 1207 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 TAF6P49848 677 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 ELF2Q15723 593 aa17.63■□□□□ 0.41
PRPF18-203ENST00000417658 WSCD1Q658N2 575 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms