RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HPCAP84074 193 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 CDK16Q00536 496 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 SFSWAPQ12872 951 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 EFTUD2Q15029 972 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■■■■□ 23.7
NCKIPSD-204ENST00000416649 CCDC89Q8N998 374 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 RBM15BQ8NDT2 890 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 OR6Y1Q8NGX8 325 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 MTBPQ96DY7 904 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 SMYD3Q9H7B4 428 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 PPARGC1AQ9UBK2 798 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 ROBO3Q96MS0 1386 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 CYP26A1O43174 497 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 CHMP2AO43633 222 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 RALAP11233 206 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 HADHBP55084 474 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 ARL4CP56559 192 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 BTKQ06187 659 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 GABPAQ06546 454 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 MPP3Q13368 585 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 USH1GQ495M9 461 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 MMEL1Q495T6 779 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 HYIQ5T013 277 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 RBM44Q6ZP01 1051 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 YIPF2Q9BWQ6 316 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 PSTPIP2Q9H939 334 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 FAM237BA0A1B0GVD1 139 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 SPDYE16A6NNV3 312 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 MAPK4P31152 587 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 SH3BGRP55822 239 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 COG7P83436 770 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 PDIA2Q13087 525 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 CBX3Q13185 183 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 PSPC1Q8WXF1 523 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 PCIF1Q9H4Z3 704 aa15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 TDRKHQ9Y2W6 561 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-204ENST00000416649 LAMB1P07942 1786 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 DDX60LQ5H9U9 1706 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 USP17L10C9JJH3 530 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 TYROBPO43914 113 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 ATP6V1B1P15313 513 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 GCLMP48507 274 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 HIRAP54198 1017 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 DLG1Q12959 904 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 MTA1Q13330 715 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 SFT2D3Q587I9 215 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 KAZNQ674X7 775 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 ACAD11Q709F0 780 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 NOP9Q86U38 636 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 SLC47A2Q86VL8 602 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 PPM1KQ8N3J5 372 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 SHKBP1Q8TBC3 707 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 PRPF31Q8WWY3 499 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 OXNAD1Q96HP4 312 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 MAST2Q6P0Q8 1798 aa15.46■□□□□ 0.07
NCKIPSD-204ENST00000416649 CALCAP01258 141 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 KITP10721 976 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 EEF2P13639 858 aaKnown RBP15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 CRABP2P29373 138 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 AQP4P55087 323 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 JAG1P78504 1218 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 ASPHQ12797 758 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 SPDYAQ5MJ70 313 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 ULK2Q8IYT8 1036 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 GLIS1Q8NBF1 620 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 CSRNP1Q96S65 589 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLC7A8Q9UHI5 535 aa15.46■□□□□ 0.06
NCKIPSD-204ENST00000416649 CDK5RAP2Q96SN8 1893 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 MEI4A8MW99 385 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 OATP04181 439 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 CCDC166P0CW27 439 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 ETS1P14921 441 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 DLG4P78352 724 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 DUS1LQ6P1R4 473 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 GSTCDQ8NEC7 633 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF398Q8TD17 642 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLCO2A1Q92959 643 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 CCDC124Q96CT7 223 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 FAM84AQ96KN4 292 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 RIOX1Q9H6W3 641 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 ARHGEF38Q9NXL2 777 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 SENP1Q9P0U3 644 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 MARCOQ9UEW3 520 aaPredicted RBP15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 EMSYQ7Z589 1322 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 BGNP21810 368 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 MAN1A1P33908 653 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 LLGL2Q6P1M3 1020 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 KLC3Q6P597 504 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 ERMNQ8TAM6 284 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 SKA1Q96BD8 255 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 CATSPER2Q96P56 530 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 RMI1Q9H9A7 625 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 PKD2L1Q9P0L9 805 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 PSMC3IPQ9P2W1 217 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms