RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ELMOD1Q8N336 334 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 TAF4BQ92750 862 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 IMPG2Q9BZV3 1241 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 TMEM8AQ9HCN3 771 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 C11orf16Q9NQ32 467 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 ARMCX3Q9UH62 379 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 FAM86C2PA6NEL3 165 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 TACC1O75410 805 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 VNN1O95497 513 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 VNN2O95498 520 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 P4HA1P13674 534 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 WARSP23381 471 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 SP100P23497 879 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 GCLMP48507 274 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 PPP3CAQ08209 521 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 DUSP4Q13115 394 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 ZNF667Q5HYK9 610 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 GRASPQ7Z6J2 395 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 PLCD3Q8N3E9 789 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 MLKLQ8NB16 471 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 ATAD1Q8NBU5 361 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 SPPL2BQ8TCT7 592 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 DUSP9Q99956 384 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 METTL14Q9HCE5 456 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 NXF1Q9UBU9 619 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 YIPF1Q9Y548 306 aa19.29■□□□□ 0.68
SEMA3B-201ENST00000416295 C2CD4DB7Z1M9 353 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 MBD3O95983 291 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 HLA-DRAP01903 254 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 ALDH1A3P47895 512 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 TUFMP49411 452 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 TWF1Q12792 350 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 INTS6LQ5JSJ4 861 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 TCERG1LQ5VWI1 586 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 KRT39Q6A163 491 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 OSTM1Q86WC4 334 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 CCDC150Q8NCX0 1101 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 GPT2Q8TD30 523 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 KBTBD7Q8WVZ9 684 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 SNX25Q9H3E2 840 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 MMRN2Q9H8L6 949 aa19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.28■□□□□ 0.68
SEMA3B-201ENST00000416295 DENND4AQ7Z401 1863 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 C2orf16Q68DN1 1984 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 FGFR1OPO95684 399 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 ASS1P00966 412 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 PTPN2P17706 415 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 FSHRP23945 695 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 ACAT1P24752 427 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 MXI1P50539 228 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 STX17P56962 302 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 PABPC1LQ4VXU2 614 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 DCAF17Q5H9S7 520 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 IQCEQ6IPM2 695 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 FRMD5Q7Z6J6 570 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 LRRTM3Q86VH5 581 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 RNF135Q8IUD6 432 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 ZDHHC14Q8IZN3 488 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 ZNF512Q96ME7 567 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 ABI2Q9NYB9 513 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 DNMT3BQ9UBC3 853 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 RAPGEFL1Q9UHV5 662 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 RWDD2AQ9UIY3 292 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 CDH9Q9ULB4 789 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 PCDHB5Q9Y5E4 795 aa19.27■□□□□ 0.68
SEMA3B-201ENST00000416295 GNA14O95837 355 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 GBP2P32456 591 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 GNL1P36915 607 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 EPHB3P54753 998 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 MAPRE1Q15691 268 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 CCDC40Q4G0X9 1142 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 GET4Q7L5D6 327 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 LEMD2Q8NC56 503 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 OR6B3Q8NGW1 331 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 TAS1R2Q8TE23 839 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 SEPT5Q99719 369 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 SYT15Q9BQS2 421 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 MRPL45Q9BRJ2 306 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 CRISPLD1Q9H336 500 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 AVENQ9NQS1 362 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 HCFC1R1Q9NWW0 138 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 DACH1Q9UI36 760 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 SLC27A5Q9Y2P5 690 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 ASB3Q9Y575 518 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 C5orf42Q9H799 3197 aa19.26■□□□□ 0.67
SEMA3B-201ENST00000416295 RHOP08100 348 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 LMO2P25791 158 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 PLA2G5P39877 138 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 NOP14P78316 857 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 NTHL1P78549 312 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 MGAT5BQ3V5L5 792 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 TTC9BQ8N6N2 239 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 FBXL13Q8NEE6 735 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 FAM122AQ96E09 287 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 PKMYT1Q99640 499 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 CORO1BQ9BR76 489 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms