RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 EDF1O60869 148 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 ZWINTO95229 277 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 LSM8O95777 96 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 CALB1P05937 261 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 NR3C2P08235 984 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 TCF4P15884 667 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 KCNA2P16389 499 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 CHRNA5P30532 468 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 GJC1P36383 396 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SSR1P43307 286 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 ARSEP51690 589 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 BLMHQ13867 455 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 PIGHQ14442 188 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 SLC1A5Q15758 541 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 ANO7Q6IWH7 933 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SWSAP1Q6NVH7 229 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 RFWD3Q6PCD5 774 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SPOCD1Q6ZMY3 1216 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 RTKN2Q8IZC4 609 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 RBBP8NLQ8NC74 664 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 CFAP61Q8NHU2 1237 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SH3TC2Q8TF17 1288 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 ZBED3Q96IU2 234 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 CGRRF1Q99675 332 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 FHDC1Q9C0D6 1143 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 POLR3FQ9H1D9 316 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 DNPEPQ9ULA0 475 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 WDR81Q562E7 1941 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 A0A1W2PPM1 405 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 DPPA5A6NC42 116 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 A6NHS1 94 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 SMAPO00193 183 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 HNRNPCL1O60812 293 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 ENTPD5O75356 428 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 RPA3P35244 121 aaPredicted RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 ZNF132P52740 706 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 VCPP55072 806 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 SOX10P56693 466 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 OASLQ15646 514 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 PLEKHG4Q58EX7 1191 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 XKR3Q5GH77 459 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 RNASEH2BQ5TBB1 312 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 SCARA3Q6AZY7 606 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 VSIG1Q86XK7 387 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 NIPA2Q8N8Q9 360 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 LRRC8CQ8TDW0 803 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 ZNF606Q8WXB4 792 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 NAF1Q96HR8 494 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
CD44-206ENST00000415148 PCDH9Q9HC56 1237 aa10.32□□□□□ -0.76
CD44-206ENST00000415148 TCRBV5S1A1TA0A578 114 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 POC1B-GALNT4F8VUJ3 575 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 TRAFD1O14545 582 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 TYROBPO43914 113 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 PDHA1P08559 390 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 TPBGLP0DKB5 382 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 TSHRP16473 764 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 KRT15P19012 456 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 PHBP35232 272 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 NAMPTP43490 491 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 PSMC4P43686 418 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 NLRP11P59045 1033 aaKnown RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 GAD2Q05329 585 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 GPS1Q13098 491 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 GRM1Q13255 1194 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 MTM1Q13496 603 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 EFHC2Q5JST6 749 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 MFSD7Q6UXD7 560 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 ABHD15Q6UXT9 468 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 LONP2Q86WA8 852 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 UBR7Q8N806 425 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 NSUN6Q8TEA1 469 aaKnown RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 PRR11Q96HE9 360 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 TBC1D10AQ9BXI6 508 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 OSBPL1AQ9BXW6 950 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 PSMC3IPQ9P2W1 217 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 hCG_1818297A0A087WSY0 165 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 LIN7AO14910 233 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 PPP1R12AO14974 1030 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 RAD17O75943 681 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 KRT1P04264 644 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 KRT10P13645 584 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 ACOT2P49753 483 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 OAZ1P54368 228 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 RAD23BP54727 409 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 GEMIN4P57678 1058 aaKnown RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 PRKCEQ02156 737 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 BAATQ14032 418 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 EFTUD2Q15029 972 aaKnown RBP eCLIP10.31□□□□□ -0.76
CD44-206ENST00000415148 SLC45A4Q5BKX6 768 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms