RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 BLOC1S1P78537 153 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 PROSER3Q2NL68 480 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 TAF7LQ5H9L4 462 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 FAM47AQ5JRC9 791 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 GJC2Q5T442 439 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-209ENST00000415046 ZNF572Q7Z3I7 529 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-209ENST00000415046 LCORLQ8N3X6 602 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 C8orf58Q8NAV2 365 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 SLC35B2Q8TB61 432 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 TSPEARQ8WU66 669 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 ZNF764Q96H86 408 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-209ENST00000415046 BABAM1Q9NWV8 329 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 CHPF2Q9P2E5 772 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 EDARQ9UNE0 448 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 USP15Q9Y4E8 981 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-209ENST00000415046 FPGT-TNNI3KV9GXZ4 949 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 IL16Q14005 1332 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 SLX4Q8IY92 1834 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 DICER1Q9UPY3 1922 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 PIPSLA2A3N6 862 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 UNC119BA6NIH7 251 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 CXorf49A8MYA2 514 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 MMP10P09238 476 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 HKR1P10072 659 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 GYS1P13807 737 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 IL6STP40189 918 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 CHN2P52757 468 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 CLRN1P58418 232 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 MRPS9P82933 396 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 EXOSC9Q06265 439 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 AIMP1Q12904 312 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 ATXN7L2Q5T6C5 722 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 AGAP9Q5VTM2 703 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 ARMC6Q6NXE6 501 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 DDX46Q7L014 1031 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 WDR63Q8IWG1 891 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 CMTR2Q8IYT2 770 aaKnown RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 TSPYL6Q8N831 410 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 REPS2Q8NFH8 660 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 OR7D4Q8NG98 312 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 BBC3Q96PG8 261 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 MYH16Q9H6N6 1097 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 NARFQ9UHQ1 456 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 SCOCQ9UIL1 159 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 EPN1Q9Y6I3 576 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-209ENST00000415046 ATRNL1Q5VV63 1379 aa5.51□□□□□ -1.53
PTPRK-209ENST00000415046 FER1L6Q2WGJ9 1857 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 DRGXA6NNA5 263 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 AKR1B10O60218 316 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 SPDEFO95238 335 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 CFIP05156 583 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ALOX15P16050 662 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 PTPN7P35236 360 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 CLK3P49761 638 aaKnown RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 SEC24CP53992 1094 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 GYS2P54840 703 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 CDK17Q00537 523 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 DDR1Q08345 913 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 STRN3Q13033 797 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 TP53BP2Q13625 1128 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ADRM1Q16186 407 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 MUM1Q2TAK8 710 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 TWISTNBQ3B726 338 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ABHD17BQ5VST6 288 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 KIF6Q6ZMV9 814 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 Q6ZVL8 140 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 NOP9Q86U38 636 aaKnown RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ADGRG3Q86Y34 549 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 RHOT2Q8IXI1 618 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 GPR156Q8NFN8 814 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 NTN5Q8WTR8 489 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ASB10Q8WXI3 467 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 AUTS2Q8WXX7 1259 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 RIN2Q8WYP3 895 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-209ENST00000415046 A0A1B0GUL6 1792 aa5.5□□□□□ -1.53
PTPRK-209ENST00000415046 ZNF521Q96K83 1311 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 C10orf71Q711Q0 1435 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 TIAM2Q8IVF5 1701 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 MYH13Q9UKX3 1938 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 KIAA0355O15063 1070 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 NPHP1O15259 732 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 CAMTA2O94983 1202 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 HMGB1P09429 215 aaKnown RBP5.49□□□□□ -1.53
PTPRK-209ENST00000415046 HOXB7P09629 217 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 EGR2P11161 476 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-209ENST00000415046 GPTP24298 496 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 ECHS1P30084 290 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 ADSLP30566 484 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-209ENST00000415046 MXRA7P84157 204 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 SP140Q13342 867 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 HLFQ16534 295 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 CCDC142Q17RM4 750 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 STRIP1Q5VSL9 837 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 TBC1D9BQ66K14 1250 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 COPS6Q7L5N1 327 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 STRA8Q7Z7C7 330 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 OR56A1Q8NGH5 318 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 STK31Q9BXU1 1019 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms