RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 MAB21L3Q8N8X9 362 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ARMC2Q8NEN0 867 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 SPATA4Q8NEY3 305 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 FUBP3Q96I24 572 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 CNDP1Q96KN2 507 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 LRRC1Q9BTT6 524 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 TMEM134Q9H6X4 195 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PSTPIP2Q9H939 334 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PRDM5Q9NQX1 630 aaPredicted RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 C1orf112Q9NSG2 853 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 RMND1Q9NWS8 449 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PCDHGC5Q9Y5F6 944 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF536O15090 1300 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 HTTP42858 3142 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 TTC26A0AVF1 554 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 RNF225M0QZC1 329 aaPredicted RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 EIF3FO00303 357 aaPredicted RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 STAM2O75886 525 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 PTPRFP10586 1907 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 CALML3P27482 149 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 HNF4AP41235 474 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 DCAF7P61962 342 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 CYP4A11Q02928 519 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 CST9Q5W186 159 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 MRM1Q6IN84 353 aaKnown RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 FAM117BQ6P1L5 589 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ALKBH5Q6P6C2 394 aaKnown RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 SYDE1Q6ZW31 735 aaPredicted RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 COLGALT2Q8IYK4 626 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 IQCKQ8N0W5 287 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 MB21D1Q8N884 522 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 LPAR1Q92633 364 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 NKD1Q969G9 470 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 SPATA17Q96L03 361 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 AMNQ9BXJ7 453 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 C6orf50Q9HD87 102 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 UBN1Q9NPG3 1134 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 TAB2Q9NYJ8 693 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF624Q9P2J8 865 aaPredicted RBP9.94□□□□□ -0.82
SNHG3-201ENST00000413987 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 FEM1BQ9UK73 627 aa9.94□□□□□ -0.82
SNHG3-201ENST00000413987 NFIBO00712 420 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 MEIS2O14770 477 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 EDIL3O43854 480 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 CPNE3O75131 537 aaKnown RBP9.93□□□□□ -0.82
SNHG3-201ENST00000413987 CAPNS1P04632 268 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 ALAS1P13196 640 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 CDC25AP30304 524 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 AFMP43652 599 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 CDK17Q00537 523 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 GRIK3Q13003 919 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 LETM2Q2VYF4 491 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 LACTB2Q53H82 288 aaPredicted RBP9.93□□□□□ -0.82
SNHG3-201ENST00000413987 TTC38Q5R3I4 469 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 SLC30A6Q6NXT4 461 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 C6orf15Q6UXA7 325 aaPredicted RBP9.93□□□□□ -0.82
SNHG3-201ENST00000413987 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNHG3-201ENST00000413987 TBCKQ8TEA7 893 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 CHURC1Q8WUH1 139 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 IQCDQ96DY2 449 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 ATP6V1G3Q96LB4 118 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 TTC1Q99614 292 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 R3HDMLQ9H3Y0 253 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 HECAQ9UBI9 543 aaPredicted RBP9.93□□□□□ -0.82
SNHG3-201ENST00000413987 HYOU1Q9Y4L1 999 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
SNHG3-201ENST00000413987 GOLGA6L10A6NI86 522 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 E7EVH7 732 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF185O15231 689 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 GOSR1O95249 250 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CFBP00751 764 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 GHRP10912 638 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 EEF1GP26641 437 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 GNA11P29992 359 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 PBLDP30039 288 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CLCN2P51788 898 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 GUCY1A3Q02108 690 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 BTKQ06187 659 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 XRCC4Q13426 336 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 SPA17Q15506 151 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 C8orf74Q6P047 294 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 POMZP3Q6PJE2 187 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 USP49Q70CQ1 688 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 NLRP8Q86W28 1048 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 EDEM1Q92611 657 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CUL5Q93034 780 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 COG8Q96MW5 612 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 ALS2CR12Q96Q35 445 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 TBCBQ99426 244 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 MMTAG2Q9BU76 263 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CCDC68Q9H2F9 335 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 XAB2Q9HCS7 855 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 SPATS2LQ9NUQ6 558 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CCPG1Q9ULG6 757 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms