RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ELF2Q15723 593 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 ZBTB6Q15916 424 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 SH3PXD2AQ5TCZ1 1133 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 NAIF1Q69YI7 327 aaPredicted RBP10.38□□□□□ -0.75
RFFL-203ENST00000413582 TRIM68Q6AZZ1 485 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 OR10T2Q8NGX3 314 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 RIN3Q8TB24 985 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 GCNAQ96QF7 691 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 SLC46A2Q9BY10 475 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 HAPLN2Q9GZV7 340 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 FBRSL1Q9HCM7 1045 aaKnown RBP10.38□□□□□ -0.75
RFFL-203ENST00000413582 GKN1Q9NS71 199 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 THG1LQ9NWX6 298 aaKnown RBP10.38□□□□□ -0.75
RFFL-203ENST00000413582 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 UBQLN1Q9UMX0 589 aaKnown RBP10.38□□□□□ -0.75
RFFL-203ENST00000413582 CCL26Q9Y258 94 aa10.38□□□□□ -0.75
RFFL-203ENST00000413582 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
RFFL-203ENST00000413582 TNRC6BQ9UPQ9 1833 aaKnown RBP10.37□□□□□ -0.75
RFFL-203ENST00000413582 TCHHQ07283 1943 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 SRRM3A6NNA2 597 aaPredicted RBP10.37□□□□□ -0.75
RFFL-203ENST00000413582 E9PMD0 336 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 RHOBTB1O94844 696 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 APBB3O95704 486 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 CAVIN2O95810 425 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 ARSAP15289 507 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 CYP3A5P20815 502 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 VEPH1Q14D04 833 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 DAB2IPQ5VWQ8 1189 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 ZPBP2Q6X784 338 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 DSTYKQ6XUX3 929 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 TMEM150AQ86TG1 271 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 CMTM8Q8IZV2 173 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 TMEM161BQ8NDZ6 487 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 SNX29Q8TEQ0 813 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 EZH1Q92800 747 aaPredicted RBP10.37□□□□□ -0.75
RFFL-203ENST00000413582 USP13Q92995 863 aaPredicted RBP10.37□□□□□ -0.75
RFFL-203ENST00000413582 SNX21Q969T3 373 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 SEPT5Q99719 369 aaPredicted RBP10.37□□□□□ -0.75
RFFL-203ENST00000413582 C17orf75Q9HAS0 396 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 PLEKHA5Q9HAU0 1116 aa10.37□□□□□ -0.75
RFFL-203ENST00000413582 CDX4O14627 284 aaPredicted RBP10.36□□□□□ -0.75
RFFL-203ENST00000413582 FAM189A1O60320 539 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 CLTAP09496 248 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 MAPTP10636 758 aaKnown RBP10.36□□□□□ -0.75
RFFL-203ENST00000413582 ODC1P11926 461 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 CEACAM1P13688 526 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
RFFL-203ENST00000413582 DRD1P21728 446 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
RFFL-203ENST00000413582 TNFSF9P41273 254 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 NEK4P51957 841 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 STRN3Q13033 797 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 DMC1Q14565 340 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 MGAT5BQ3V5L5 792 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 FBXO43Q4G163 708 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 SLC39A12Q504Y0 691 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 PMS2CLQ68D20 193 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 RINT1Q6NUQ1 792 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 C1orf186Q6ZWK4 172 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 SYT13Q7L8C5 426 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 KCNK18Q7Z418 384 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 C4orf32Q8N8J7 132 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 IGSF22Q8N9C0 903 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 RPLP0P6Q8NHW5 317 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 ZCCHC14Q8WYQ9 949 aaKnown RBP10.36□□□□□ -0.75
RFFL-203ENST00000413582 ACDQ96AP0 544 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 SENP8Q96LD8 212 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 SCNM1Q9BWG6 230 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 KIF9Q9HAQ2 790 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 TMEM9BQ9NQ34 198 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 LRWD1Q9UFC0 647 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 EBF1Q9UH73 591 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 ZMYM5Q9UJ78 669 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 TBX20Q9UMR3 447 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 FREM2Q5SZK8 3169 aa10.36□□□□□ -0.75
RFFL-203ENST00000413582 ACACAQ13085 2346 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 ANAPC1Q9H1A4 1944 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 PLXND1Q9Y4D7 1925 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 SFI1A8K8P3 1242 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 LACTBL1A8MY62 500 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 CLDN3O15551 220 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 XPOTO43592 962 aaKnown RBP10.35□□□□□ -0.75
RFFL-203ENST00000413582 CYP11A1P05108 521 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.752e-6■■□□□ 12.6
RFFL-203ENST00000413582 GBP1P32455 592 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 GJA4P35212 333 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 AVPR1AP37288 418 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 TUFMP49411 452 aaKnown RBP10.35□□□□□ -0.75
RFFL-203ENST00000413582 GALK1P51570 392 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms