RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 RTP3Q9BQQ7 232 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 OSBPL6Q9BZF3 934 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 IMPG2Q9BZV3 1241 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 ASAH2Q9NR71 780 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 TSHZ2Q9NRE2 1034 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 DNMT3BQ9UBC3 853 aaKnown RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 MTMR11A4FU01 709 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 GOLGA8IPA6NC78 632 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 GOLGA8JA6NMD2 632 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 TISP43B9A030 160 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 I3L4J1 428 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 PSMA7O14818 248 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 CLIC2O15247 247 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 SPTLC1O15269 473 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ADAM12O43184 909 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 GNA14O95837 355 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 CST3P01034 146 aaPredicted RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 C4BPAP04003 597 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 DLATP10515 647 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 HAPLN1P10915 354 aaPredicted RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 NR2F2P24468 414 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 POLR2BP30876 1174 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 GNL1P36915 607 aaPredicted RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 VAMP7P51809 220 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ARPP19P56211 112 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 TNNC1P63316 161 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 AMPD2Q01433 879 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 CETN1Q12798 172 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 DUSP4Q13115 394 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 SOWAHAQ2M3V2 549 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 WDR72Q3MJ13 1102 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ZACNQ401N2 412 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ARHGAP15Q53QZ3 475 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ZNF667Q5HYK9 610 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 WSCD1Q658N2 575 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 NELFCDQ8IXH7 590 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 PDCL2Q8N4E4 241 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 DNASE1L2Q92874 299 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 IRF7Q92985 503 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 EXOC4Q96A65 974 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 TRMT2BQ96GJ1 504 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 SPATA17Q96L03 361 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 APOL5Q9BWW9 433 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 FGFBP2Q9BYJ0 223 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 SNX25Q9H3E2 840 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 CYP3A43Q9HB55 503 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 ZFP14Q9HCL3 533 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 DDX43Q9NXZ2 648 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 MAGEC2Q9UBF1 373 aaPredicted RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 CACNG4Q9UBN1 327 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 MUTYHQ9UIF7 546 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 MRPS17Q9Y2R5 130 aaKnown RBP6.85□□□□□ -1.31
USP54-202ENST00000413442 PCDHA5Q9Y5H7 936 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 SNX9Q9Y5X1 595 aa6.85□□□□□ -1.31
USP54-202ENST00000413442 BDP1A6H8Y1 2624 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 ATP8B3O60423 1300 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MAN2B1O00754 1011 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 TRIM66O15016 1216 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 SLC16A3O15427 465 aaKnown RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 P4HA2O15460 535 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CCL16O15467 120 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 SEC24AO95486 1093 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 CCNE1P24864 410 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CYP2J2P51589 502 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 STARD6P59095 220 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 PLCB2Q00722 1185 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 TWF1Q12792 350 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 BFSP1Q12934 665 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 HTR4Q13639 388 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 NCOA4Q13772 614 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MGAT5BQ3V5L5 792 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 SLC39A12Q504Y0 691 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 ZCWPW2Q504Y3 356 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 PRSS36Q5K4E3 855 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CEP135Q66GS9 1140 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 KRT39Q6A163 491 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MAMSTRQ6ZN01 415 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 SPATA2LQ8IUW3 424 aaPredicted RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 MFSD6LQ8IWD5 586 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 ADGRF2Q8IZF7 708 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CRYBG2Q8N1P7 616 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 NOC3LQ8WTT2 800 aaKnown RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 OVCA2Q8WZ82 227 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 SMARCD2Q92925 531 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 HPS3Q969F9 1004 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 JAKMIP2Q96AA8 810 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CCDC127Q96BQ5 260 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 ASIC4Q96FT7 647 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 FAM81BQ96LP2 452 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms