RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 GPATCH11Q8N954 259 aa6.12□□□□□ -1.43
PRDM2-206ENST00000413440 GSDMAQ96QA5 445 aa6.12□□□□□ -1.43
PRDM2-206ENST00000413440 C17orf80Q9BSJ5 609 aa6.12□□□□□ -1.43
PRDM2-206ENST00000413440 NSUN3Q9H649 340 aaKnown RBP6.12□□□□□ -1.43
PRDM2-206ENST00000413440 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
PRDM2-206ENST00000413440 IKBKBO14920 756 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 THAP12O43422 761 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SYNCRIPO60506 623 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ASMTLO95671 621 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KCNB1Q14721 858 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 EXOC3L4Q17RC7 722 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ITIH5Q86UX2 942 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 RABEP2Q9H5N1 569 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 H2AFY2Q9P0M6 372 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 GPN3Q9UHW5 284 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PCDHA2Q9Y5H9 948 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ZBTB39O15060 712 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 STAT1P42224 750 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MAP3K10Q02779 954 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SF3A3Q12874 501 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MOGSQ13724 837 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SLC27A1Q6PCB7 646 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 NIPA1Q7RTP0 329 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 GPD1LQ8N335 351 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 CEP120Q8N960 986 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 COLGALT1Q8NBJ5 622 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 OR8K1Q8NGG5 319 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SLC5A5Q92911 643 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 COL1A2P08123 1366 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 LOC102724159A0A0B4J2E5 919 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 TTLL13PA6NNM8 815 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PIK3R2O00459 728 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 CYB561D2O14569 222 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 FGF18O76093 207 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MBL2P11226 248 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 AXLP30530 894 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 AVPR1AP37288 418 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PDX1P52945 283 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 YWHAHQ04917 246 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PWP2Q15269 919 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 LLGL1Q15334 1064 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ZNF667Q5HYK9 610 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 HEATR6Q6AI08 1181 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 RPAINQ86UA6 219 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 FAM186BQ8IYM0 893 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KIAA0319LQ8IZA0 1049 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 STKLD1Q8NE28 680 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PBXIP1Q96AQ6 731 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 TRIM7Q9C029 511 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 CA14Q9ULX7 337 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KCNK3O14649 394 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 STMN1P16949 149 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MNAT1P51948 309 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 LONRF2Q1L5Z9 754 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 TDRD10Q5VZ19 366 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KAZNQ674X7 775 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 IFT20Q8IY31 132 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 KRT222Q8N1A0 295 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PRPF18Q99633 342 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PPANQ9NQ55 473 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ABCF3Q9NUQ8 709 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 MED24O75448 989 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 RALAP11233 206 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 HPDP32754 393 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PSMC2P35998 433 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 GLUD2P49448 558 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 WDR5P61964 334 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 BDH1Q02338 343 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 BYSLQ13895 437 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 RPS6KA1Q15418 735 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ZC2HC1CQ53FD0 456 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ATOH1Q92858 354 aaPredicted RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 HPS3Q969F9 1004 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 FAM149B1Q96BN6 582 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PPP1R13BQ96KQ4 1090 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 ZNF304Q9HCX3 659 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 RWDD2AQ9UIY3 292 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 UTP11Q9Y3A2 253 aaKnown RBP6.11□□□□□ -1.43
PRDM2-206ENST00000413440 PCDHA11Q9Y5I1 949 aa6.11□□□□□ -1.43
PRDM2-206ENST00000413440 SF3B1O75533 1304 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRDM2-206ENST00000413440 PIK3CDO00329 1044 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
PRDM2-206ENST00000413440 TCF3P15923 654 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 KCNA2P16389 499 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 EIF4BP23588 611 aaKnown RBP6.1□□□□□ -1.43
PRDM2-206ENST00000413440 NAMPTP43490 491 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 LGSNQ5TDP6 509 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 NAA35Q5VZE5 725 aa6.1□□□□□ -1.43
PRDM2-206ENST00000413440 TIGD7Q6NT04 549 aaPredicted RBP6.1□□□□□ -1.43
PRDM2-206ENST00000413440 MPZL3Q6UWV2 235 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms