RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PHACTR2O75167 634 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 HAPLN1P10915 354 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 ATF6P18850 670 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 CD72P21854 359 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 LMO2P25791 158 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 GABRR2P28476 465 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 TUFMP49411 452 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 CYP4F8P98187 520 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYL7Q01449 175 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 TSPY1Q01534 308 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 PLD1Q13393 1074 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 TRPC3Q13507 836 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 TAF12Q16514 161 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 DDR2Q16832 855 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 SLC44A4Q53GD3 710 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 STXBP5Q5T5C0 1151 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 CEP135Q66GS9 1140 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 CWF19L1Q69YN2 538 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 TMC8Q8IU68 726 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 ERCC4Q92889 916 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 CCDC47Q96A33 483 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 PHOX2BQ99453 314 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 GZF1Q9H116 711 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 KCTD10Q9H3F6 313 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 ATXN3LQ9H3M9 355 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZFP14Q9HCL3 533 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 AVENQ9NQS1 362 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 FAM86C1Q9NVL1 165 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 GDAP2Q9NXN4 497 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 MAGED2Q9UNF1 606 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 PCDHB5Q9Y5E4 795 aa10.93□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYBPHLA2RUH7 354 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 LRRIQ3A6PVS8 624 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 LRRN2O75325 713 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ECI2O75521 394 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 NR3C1P04150 777 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 DCNP07585 359 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 CYP2F1P24903 491 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYL6P60660 151 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 PSMC1P62191 440 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 DLG4P78352 724 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 NHLH1Q02575 133 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 TCF15Q12870 199 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 BIRC3Q13489 604 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 PNOCQ13519 176 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 VEPH1Q14D04 833 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ALYREFQ86V81 257 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 TMEM86AQ8N2M4 240 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 TOP6BLQ8N6T0 577 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 GOLGA5Q8TBA6 731 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 SPPL2BQ8TCT7 592 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 PSMG2Q969U7 264 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ASB16Q96NS5 453 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ACBD6Q9BR61 282 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 MRPL45Q9BRJ2 306 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 FOXQ1Q9C009 403 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 TBC1D17Q9HA65 648 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ARHGEF3Q9NR81 526 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 SLC2A4RGQ9NR83 387 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 DMAC2Q9NW81 257 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 CGNQ9P2M7 1197 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 C2orf16Q68DN1 1984 aa10.92□□□□□ -0.66
NCKIPSD-202ENST00000413374 CITO14578 2027 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 PDXKO00764 312 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 GABRDO14764 452 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 CALUO43852 315 aaPredicted RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 MICAL2O94851 1124 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 RHOBTB3O94955 611 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYL1P05976 194 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 AOC1P19801 751 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 FCARP24071 287 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 GNL1P36915 607 aaPredicted RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 LHX1P48742 406 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 CLCN5P51795 746 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 EPHA5P54756 1037 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 WDR72Q3MJ13 1102 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 INTS6LQ5JSJ4 861 aaKnown RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 GPR158Q5T848 1215 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 ISM2Q6H9L7 571 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 VITQ6UXI7 678 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 ITIH5Q86UX2 942 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 SPATA2LQ8IUW3 424 aaPredicted RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 SCN4BQ8IWT1 228 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 LEMD2Q8NC56 503 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 OR6B3Q8NGW1 331 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 TTC8Q8TAM2 541 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 PARD3BQ8TEW8 1205 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 KBTBD7Q8WVZ9 684 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 SMARCD2Q92925 531 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms