RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 ADAM15Q13444 863 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 CUL2Q13617 745 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 SLC39A12Q504Y0 691 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 INTS6LQ5JSJ4 861 aaKnown RBP13.53□□□□□ -0.24
ZNF3-204ENST00000412947 LIN9Q5TKA1 542 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 PPM1KQ8N3J5 372 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 ZNF461Q8TAF7 563 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 PABPC5Q96DU9 382 aaKnown RBP13.53□□□□□ -0.24
ZNF3-204ENST00000412947 FAM81BQ96LP2 452 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 TMEM209Q96SK2 561 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 DZANK1Q9NVP4 752 aa13.53□□□□□ -0.24
ZNF3-204ENST00000412947 SZT2Q5T011 3432 aa13.52□□□□□ -0.24
ZNF3-204ENST00000412947 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.24
ZNF3-204ENST00000412947 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 PRRG1O14668 218 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 HCRTO43612 131 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 ABLIM3O94929 683 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 GLP2RO95838 553 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 SERPINC1P01008 464 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 CD58P19256 250 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 SLC9A1P19634 815 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 LMO2P25791 158 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 PON1P27169 355 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 NDST1P52848 882 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 RBM10P98175 930 aaKnown RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 SMARCB1Q12824 385 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 KCNC3Q14003 757 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 COL19A1Q14993 1142 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 MAPRE1Q15691 268 aaKnown RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 CTC1Q2NKJ3 1217 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 TRIM65Q6PJ69 517 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 TMEM184AQ6ZMB5 413 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 RNF19BQ6ZMZ0 732 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 CCDC149Q6ZUS6 474 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 RNF214Q8ND24 703 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 VN1R2Q8NFZ6 395 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 PGLYRP2Q96PD5 576 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 FAM124BQ9H5Z6 455 aaPredicted RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 MAFFQ9ULX9 164 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 BARX2Q9UMQ3 279 aaPredicted RBP13.52□□□□□ -0.25
ZNF3-204ENST00000412947 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
ZNF3-204ENST00000412947 MTMR11A4FU01 709 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 TBX10O75333 385 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ATF2P15336 505 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 HOXB8P17481 243 aaPredicted RBP13.51□□□□□ -0.25
ZNF3-204ENST00000412947 GCNT1Q02742 428 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 UBXN1Q04323 297 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ADCY1Q08828 1119 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 INCA1Q0VD86 236 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 HLA-CQ95604 372 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ARID3AQ99856 593 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 LSM14BQ9BX40 385 aaKnown RBP13.51□□□□□ -0.25
ZNF3-204ENST00000412947 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 SFXN1Q9H9B4 322 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 CISHQ9NSE2 258 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 APEX2Q9UBZ4 518 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 GTF3C4Q9UKN8 822 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 COG5Q9UP83 839 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
ZNF3-204ENST00000412947 ATP2C2O75185 946 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 CILPO75339 1184 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 C8AP07357 584 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 PTPN1P18031 435 aaKnown RBP13.5□□□□□ -0.25
ZNF3-204ENST00000412947 MFAP3P55082 362 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 UVSSAQ2YD98 709 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 MDH1BQ5I0G3 518 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 PPM1LQ5SGD2 360 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 PHLDB3Q6NSJ2 640 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 C4orf50Q6ZRC1 276 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 LRRTM3Q86VH5 581 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
ZNF3-204ENST00000412947 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 SLC7A14Q8TBB6 771 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
ZNF3-204ENST00000412947 MYLPFQ96A32 169 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms