RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 TAPT1Q6NXT6 567 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 PPP1R16BQ96T49 567 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 FDXACB1Q9BRP7 624 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 STRIP2Q9ULQ0 834 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 MCF2P10911 925 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 CDH8P55286 799 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 PTPN20Q4JDL3 420 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 SPATS2Q86XZ4 545 aaKnown RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 TMEM130Q8N3G9 435 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 NIPA2Q8N8Q9 360 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 GPRC5AQ8NFJ5 357 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 ROPN1BQ9BZX4 212 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 LHX5Q9H2C1 402 aa17.41■□□□□ 0.38
HCG18-233ENST00000412685 ROPN1Q9HAT0 212 aaPredicted RBP17.41■□□□□ 0.38
HCG18-233ENST00000412685 MAGEB2O15479 319 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 TJP3O95049 919 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 GH1P01241 217 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
HCG18-233ENST00000412685 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 TXNRD3NBQ6F5E7 133 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 JADE1Q6IE81 842 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 MFSD5Q6N075 450 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 GSTA5Q7RTV2 222 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 LINC01465Q8N7H1 131 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 RASSF4Q9H2L5 321 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 DNAJC17Q9NVM6 304 aaKnown RBP17.4■□□□□ 0.38
HCG18-233ENST00000412685 AKT3Q9Y243 479 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 MED7O43513 233 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 LIASO43766 372 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 TTC4O95801 387 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 ITGB3P05106 788 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
HCG18-233ENST00000412685 KLRC2P26717 231 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 ADORA2AP29274 412 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 POLR2BP30876 1174 aaKnown RBP17.4■□□□□ 0.38
HCG18-233ENST00000412685 RAD23BP54727 409 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 TNFAIP8L3Q5GJ75 292 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 IFNLR1Q8IU57 520 aaPredicted RBP17.4■□□□□ 0.38
HCG18-233ENST00000412685 BBOF1Q8ND07 529 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 AFG1LQ8WV93 481 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 CENPTQ96BT3 561 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 SELENOSQ9BQE4 189 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 SDCBP2Q9H190 292 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 PDZD7Q9H5P4 517 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 SMYD3Q9H7B4 428 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
HCG18-233ENST00000412685 GOLGA8SH3BPF8 625 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 ZNF286BP0CG31 522 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 CHN1P15882 459 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 MAGEA9P43362 315 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 COPS2P61201 443 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 CCNA1P78396 465 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 TNFAIP2Q03169 654 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 LMNB2Q03252 620 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 IZUMO3Q5VZ72 239 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 PPTC7Q8NI37 304 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 GTF3C2Q8WUA4 911 aaPredicted RBP17.39■□□□□ 0.38
HCG18-233ENST00000412685 ACSF2Q96CM8 615 aaPredicted RBP17.39■□□□□ 0.38
HCG18-233ENST00000412685 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 FAXDC2Q96IV6 333 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 CPB2Q96IY4 423 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 XPO6Q96QU8 1125 aaKnown RBP17.39■□□□□ 0.38
HCG18-233ENST00000412685 VTA1Q9NP79 307 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 DNPEPQ9ULA0 475 aa17.39■□□□□ 0.38
HCG18-233ENST00000412685 VTNP04004 478 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 RFC1P35251 1148 aaPredicted RBP17.39■□□□□ 0.37
HCG18-233ENST00000412685 ORC1Q13415 861 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 LONRF1Q17RB8 773 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 ERMARDQ5T6L9 678 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 PRUNE1Q86TP1 453 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 CXorf38Q8TB03 319 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 IPO4Q8TEX9 1081 aaKnown RBP17.39■□□□□ 0.37
HCG18-233ENST00000412685 PWWP2AQ96N64 755 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 DDX56Q9NY93 547 aaKnown RBP17.39■□□□□ 0.37
HCG18-233ENST00000412685 TJP2Q9UDY2 1190 aa17.39■□□□□ 0.37
HCG18-233ENST00000412685 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
HCG18-233ENST00000412685 LRRD1A4D1F6 860 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 KRT3P12035 628 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 PTPN7P35236 360 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 KYNUQ16719 465 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 TFDP3Q5H9I0 405 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 DRICH1Q6PGQ1 229 aaPredicted RBP17.38■□□□□ 0.37
HCG18-233ENST00000412685 MICALCLQ6ZW33 695 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 ASB7Q9H672 318 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 hCG_1818297A0A087WSY0 165 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
HCG18-233ENST00000412685 PSMA2P25787 234 aa17.38■□□□□ 0.37
HCG18-233ENST00000412685 EAPPQ56P03 285 aaPredicted RBP17.38■□□□□ 0.37
HCG18-233ENST00000412685 SLC4A11Q8NBS3 891 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms