RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HMGB1P1B2RPK0 211 aaPredicted RBP25.97■■□□□ 1.75
VRK2-202ENST00000412104 MYZAPP0CAP1 466 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 HUNKP57058 714 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 NT5DC4Q86YG4 428 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 PPP1R13LQ8WUF5 828 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 KAT2BQ92831 832 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 ART4Q93070 314 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 TMEM176AQ96HP8 235 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 KLHL11Q9NVR0 708 aa25.97■■□□□ 1.75
VRK2-202ENST00000412104 MTRF1LQ9UGC7 380 aaKnown RBP25.97■■□□□ 1.75
VRK2-202ENST00000412104 F8VP50 259 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 IGF2BP3O00425 579 aaKnown RBP eCLIP25.96■■□□□ 1.75
VRK2-202ENST00000412104 GPR32O75388 356 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 NPTXRO95502 500 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 RBP5P82980 135 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 SKOR1P84550 965 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 LENG1Q96BZ8 264 aaPredicted RBP25.96■■□□□ 1.75
VRK2-202ENST00000412104 KIF12Q96FN5 646 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 GCOM2Q9BZD3 368 aaPredicted RBP25.96■■□□□ 1.75
VRK2-202ENST00000412104 TJP2Q9UDY2 1190 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 NRCAMQ92823 1304 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 HOXA11P31270 313 aaPredicted RBP25.96■■□□□ 1.75
VRK2-202ENST00000412104 PMS2P54278 862 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 IRF5Q13568 498 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 PIGHQ14442 188 aaPredicted RBP25.96■■□□□ 1.75
VRK2-202ENST00000412104 ATP13A4Q4VNC1 1196 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 LRRC38Q5VT99 294 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 OLFML2BQ68BL8 750 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 TLK2Q86UE8 772 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 NIPA2Q8N8Q9 360 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 GRK7Q8WTQ7 553 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 RNF25Q96BH1 459 aaPredicted RBP25.96■■□□□ 1.75
VRK2-202ENST00000412104 FAM129AQ9BZQ8 928 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 EPB41L4BQ9H329 900 aa25.96■■□□□ 1.75
VRK2-202ENST00000412104 STAU1O95793 577 aaKnown RBP25.95■■□□□ 1.74
VRK2-202ENST00000412104 ZNF865P0CJ78 1059 aaPredicted RBP25.95■■□□□ 1.74
VRK2-202ENST00000412104 ZSCAN26Q16670 478 aa25.95■■□□□ 1.74
VRK2-202ENST00000412104 SYDE1Q6ZW31 735 aaPredicted RBP25.95■■□□□ 1.74
VRK2-202ENST00000412104 RBM41Q96IZ5 413 aaKnown RBP25.95■■□□□ 1.74
VRK2-202ENST00000412104 CAPS2Q9BXY5 557 aa25.95■■□□□ 1.74
VRK2-202ENST00000412104 HOMER3Q9NSC5 361 aa25.95■■□□□ 1.74
VRK2-202ENST00000412104 TRIP11Q15643 1979 aa25.95■■□□□ 1.74
VRK2-202ENST00000412104 MBLAC1A4D2B0 266 aaPredicted RBP25.94■■□□□ 1.74
VRK2-202ENST00000412104 GOLGA8SH3BPF8 625 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 RPS6KA5O75582 802 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 NFX1Q12986 1120 aaKnown RBP25.94■■□□□ 1.74
VRK2-202ENST00000412104 PTK6Q13882 451 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 KDM7AQ6ZMT4 941 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 CATSPER4Q7RTX7 472 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 RCOR2Q8IZ40 523 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 CPXM1Q96SM3 734 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 PABPC3Q9H361 631 aaKnown RBP25.94■■□□□ 1.74
VRK2-202ENST00000412104 CENPHQ9H3R5 247 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 CDHR5Q9HBB8 845 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.94■■□□□ 1.74
VRK2-202ENST00000412104 MICAL2O94851 1124 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 KRT1P04264 644 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 CDC42EP1Q00587 391 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 INCA1Q0VD86 236 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 SLC27A1Q6PCB7 646 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 RUFY4Q6ZNE9 571 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 RASAL3Q86YV0 1011 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 SLITRK1Q96PX8 696 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 OSMRQ99650 979 aa25.94■■□□□ 1.74
VRK2-202ENST00000412104 SMIM35A0A1B0GVV1 85 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 SIGLEC16A6NMB1 481 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 PI4K2BG5E9Z4 385 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 GAS8O95995 478 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 CYP2C9P11712 490 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 NR1D1P20393 614 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 GSCP56915 257 aaPredicted RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 PSMC1P62191 440 aaKnown RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 IRX5P78411 483 aaPredicted RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 CALCOCO2Q13137 446 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 MFSD10Q14728 455 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 TAF1CQ15572 869 aaPredicted RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 CCNG2Q16589 344 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 ZFYVE27Q5T4F4 411 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 LRRC31Q6UY01 552 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 APBB1IPQ7Z5R6 666 aaPredicted RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 ATL2Q8NHH9 583 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 CCDC114Q96M63 670 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 CXCL16Q9H2A7 254 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 SNTG2Q9NY99 539 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 WHRNQ9P202 907 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 ASIC3Q9UHC3 531 aa25.93■■□□□ 1.74
VRK2-202ENST00000412104 BARX2Q9UMQ3 279 aaPredicted RBP25.93■■□□□ 1.74
VRK2-202ENST00000412104 M0QYV0 167 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 ERBB2P04626 1255 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 KRT3P12035 628 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 CETN2P41208 172 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 EIF2AQ9BY44 585 aaKnown RBP25.92■■□□□ 1.74
VRK2-202ENST00000412104 PLEKHA5Q9HAU0 1116 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 FEZ2Q9UHY8 353 aaPredicted RBP25.92■■□□□ 1.74
VRK2-202ENST00000412104 NUDT17P0C025 328 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 VDRP11473 427 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 RFC1P35251 1148 aaPredicted RBP25.92■■□□□ 1.74
VRK2-202ENST00000412104 ATP1A2P50993 1020 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 NDST1P52848 882 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 EIF3BP55884 814 aaKnown RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms