RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 WSCD1Q658N2 575 aa8.8□□□□□ -1
RPE-204ENST00000411934 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
RPE-204ENST00000411934 LLGL2Q6P1M3 1020 aa8.8□□□□□ -1
RPE-204ENST00000411934 RSPO2Q6UXX9 243 aaPredicted RBP8.8□□□□□ -1
RPE-204ENST00000411934 C4orf50Q6ZRC1 276 aa8.8□□□□□ -1
RPE-204ENST00000411934 GPR149Q86SP6 731 aa8.8□□□□□ -1
RPE-204ENST00000411934 UNC93AQ86WB7 457 aa8.8□□□□□ -1
RPE-204ENST00000411934 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.8□□□□□ -1
RPE-204ENST00000411934 ENOX1Q8TC92 643 aaKnown RBP8.8□□□□□ -1
RPE-204ENST00000411934 KBTBD7Q8WVZ9 684 aa8.8□□□□□ -1
RPE-204ENST00000411934 TNIP3Q96KP6 325 aa8.8□□□□□ -1
RPE-204ENST00000411934 CNOT6LQ96LI5 555 aaKnown RBP8.8□□□□□ -1
RPE-204ENST00000411934 FAM81BQ96LP2 452 aa8.8□□□□□ -1
RPE-204ENST00000411934 BPIFA3Q9BQP9 254 aa8.8□□□□□ -1
RPE-204ENST00000411934 SRRTQ9BXP5 876 aaKnown RBP8.8□□□□□ -1
RPE-204ENST00000411934 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
RPE-204ENST00000411934 NIF3L1Q9GZT8 377 aa8.8□□□□□ -1
RPE-204ENST00000411934 NAT10Q9H0A0 1025 aaKnown RBP8.8□□□□□ -1
RPE-204ENST00000411934 AVENQ9NQS1 362 aaPredicted RBP8.8□□□□□ -1
RPE-204ENST00000411934 RAB20Q9NX57 234 aa8.8□□□□□ -1
RPE-204ENST00000411934 DDX43Q9NXZ2 648 aaKnown RBP8.8□□□□□ -1
RPE-204ENST00000411934 TMEM63CQ9P1W3 806 aa8.8□□□□□ -1
RPE-204ENST00000411934 USTQ9Y2C2 406 aa8.8□□□□□ -1
RPE-204ENST00000411934 USP15Q9Y4E8 981 aaPredicted RBP8.8□□□□□ -1
RPE-204ENST00000411934 ASB3Q9Y575 518 aa8.8□□□□□ -1
RPE-204ENST00000411934 PRUNE2Q8WUY3 3088 aa8.79□□□□□ -1
RPE-204ENST00000411934 MTMR11A4FU01 709 aa8.79□□□□□ -1
RPE-204ENST00000411934 H3BQ06 376 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 ADAM12O43184 909 aa8.79□□□□□ -1
RPE-204ENST00000411934 LRG1P02750 347 aa8.79□□□□□ -1
RPE-204ENST00000411934 AFPP02771 609 aaKnown RBP8.79□□□□□ -1
RPE-204ENST00000411934 TBXAS1P24557 533 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 EEF1GP26641 437 aaKnown RBP8.79□□□□□ -1
RPE-204ENST00000411934 MAGEA11P43364 429 aa8.79□□□□□ -1
RPE-204ENST00000411934 TUFMP49411 452 aaKnown RBP8.79□□□□□ -1
RPE-204ENST00000411934 STX17P56962 302 aa8.79□□□□□ -1
RPE-204ENST00000411934 YWHAEP62258 255 aaKnown RBP8.79□□□□□ -1
RPE-204ENST00000411934 INCA1Q0VD86 236 aa8.79□□□□□ -1
RPE-204ENST00000411934 CBX2Q14781 532 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 WDR44Q5JSH3 913 aa8.79□□□□□ -1
RPE-204ENST00000411934 PPM1LQ5SGD2 360 aa8.79□□□□□ -1
RPE-204ENST00000411934 ATAT1Q5SQI0 421 aa8.79□□□□□ -1
RPE-204ENST00000411934 CAVIN1Q6NZI2 390 aaKnown RBP8.79□□□□□ -1
RPE-204ENST00000411934 EP400NLQ6ZTU2 488 aa8.79□□□□□ -1
RPE-204ENST00000411934 PALB2Q86YC2 1186 aa8.79□□□□□ -1
RPE-204ENST00000411934 ELMOD1Q8N336 334 aa8.79□□□□□ -1
RPE-204ENST00000411934 OR10T2Q8NGX3 314 aa8.79□□□□□ -1
RPE-204ENST00000411934 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
RPE-204ENST00000411934 TAS1R2Q8TE23 839 aa8.79□□□□□ -1
RPE-204ENST00000411934 MMS19Q96T76 1030 aa8.79□□□□□ -1
RPE-204ENST00000411934 PKMYT1Q99640 499 aa8.79□□□□□ -1
RPE-204ENST00000411934 RTP3Q9BQQ7 232 aa8.79□□□□□ -1
RPE-204ENST00000411934 PHF7Q9BWX1 381 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 PRDM6Q9NQX0 595 aa8.79□□□□□ -1
RPE-204ENST00000411934 ZMYM5Q9UJ78 669 aa8.79□□□□□ -1
RPE-204ENST00000411934 NR2E1Q9Y466 385 aa8.79□□□□□ -1
RPE-204ENST00000411934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.79□□□□□ -1
RPE-204ENST00000411934 TIMM13Q9Y5L4 95 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 INSL5Q9Y5Q6 135 aa8.79□□□□□ -1
RPE-204ENST00000411934 ZFP37Q9Y6Q3 630 aaPredicted RBP8.79□□□□□ -1
RPE-204ENST00000411934 PRRG1O14668 218 aa8.78□□□□□ -1
RPE-204ENST00000411934 MICAL2O94851 1124 aa8.78□□□□□ -1
RPE-204ENST00000411934 FGF19O95750 216 aa8.78□□□□□ -1
RPE-204ENST00000411934 BMP1P13497 986 aa8.78□□□□□ -1
RPE-204ENST00000411934 ASPAP45381 313 aa8.78□□□□□ -1
RPE-204ENST00000411934 MYL5Q02045 173 aa8.78□□□□□ -1
RPE-204ENST00000411934 GCNT1Q02742 428 aa8.78□□□□□ -1
RPE-204ENST00000411934 TFF2Q03403 129 aa8.78□□□□□ -1
RPE-204ENST00000411934 TYRO3Q06418 890 aa8.78□□□□□ -1
RPE-204ENST00000411934 ADCY1Q08828 1119 aa8.78□□□□□ -1
RPE-204ENST00000411934 MAN2A1Q16706 1144 aa8.78□□□□□ -1
RPE-204ENST00000411934 CBWD6Q4V339 395 aa8.78□□□□□ -1
RPE-204ENST00000411934 CBWD3Q5JTY5 395 aa8.78□□□□□ -1
RPE-204ENST00000411934 CBWD5Q5RIA9 395 aa8.78□□□□□ -1
RPE-204ENST00000411934 RARS2Q5T160 578 aaKnown RBP8.78□□□□□ -1
RPE-204ENST00000411934 FAM171BQ6P995 826 aa8.78□□□□□ -1
RPE-204ENST00000411934 VSTM1Q6UX27 236 aa8.78□□□□□ -1
RPE-204ENST00000411934 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
RPE-204ENST00000411934 ITIH5Q86UX2 942 aa8.78□□□□□ -1
RPE-204ENST00000411934 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
RPE-204ENST00000411934 ADHFE1Q8IWW8 467 aa8.78□□□□□ -1
RPE-204ENST00000411934 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
RPE-204ENST00000411934 SMG7Q92540 1137 aaKnown RBP8.78□□□□□ -1
RPE-204ENST00000411934 JAKMIP2Q96AA8 810 aa8.78□□□□□ -1
RPE-204ENST00000411934 ZNF707Q96C28 371 aaPredicted RBP8.78□□□□□ -1
RPE-204ENST00000411934 MED15Q96RN5 788 aa8.78□□□□□ -1
RPE-204ENST00000411934 SYT15Q9BQS2 421 aa8.78□□□□□ -1
RPE-204ENST00000411934 SNX25Q9H3E2 840 aa8.78□□□□□ -1
RPE-204ENST00000411934 WDR6Q9NNW5 1121 aaKnown RBP8.78□□□□□ -1
RPE-204ENST00000411934 MAGEC2Q9UBF1 373 aaPredicted RBP8.78□□□□□ -1
RPE-204ENST00000411934 DAAM1Q9Y4D1 1078 aa8.78□□□□□ -1
RPE-204ENST00000411934 YIPF1Q9Y548 306 aa8.78□□□□□ -1
RPE-204ENST00000411934 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
RPE-204ENST00000411934 ATP8B3O60423 1300 aa8.78□□□□□ -1
RPE-204ENST00000411934 CLUHO75153 1309 aa8.78□□□□□ -1
RPE-204ENST00000411934 C2orf16Q68DN1 1984 aa8.77□□□□□ -1
RPE-204ENST00000411934 CCDC195A0A1B0GUA6 201 aa8.77□□□□□ -1.01
RPE-204ENST00000411934 CILPO75339 1184 aa8.77□□□□□ -1.01
RPE-204ENST00000411934 TPM2P07951 284 aa8.77□□□□□ -1.01
RPE-204ENST00000411934 RFX1P22670 979 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms