RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 CCDC27Q2M243 656 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZNF618Q5T7W0 954 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 TEDDM1Q5T9Z0 273 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 KIRREL2Q6UWL6 708 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 FAM9AQ8IZU1 332 aaPredicted RBP2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 IQCF1Q8N6M8 205 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 KLHDC4Q8TBB5 520 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 DAZAP1Q96EP5 407 aaKnown RBP2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 EFHD1Q9BUP0 239 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 TINAGL1Q9GZM7 467 aaPredicted RBP2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 PRDM12Q9H4Q4 367 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 TMEM8AQ9HCN3 771 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 LANCL2Q9NS86 450 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 KCNG2Q9UJ96 466 aa2.15□□□□□ -2.07
RNU4-61P-201ENST00000411243 IGLV5-39A0A0G2JS06 123 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 FOXN3O00409 490 aaPredicted RBP2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 KLF4O43474 513 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 AKR1B10O60218 316 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 A1BGP04217 495 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 ALDH9A1P49189 494 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 SSRP1Q08945 709 aaKnown RBP2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 LONRF2Q1L5Z9 754 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 NADSYN1Q6IA69 706 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 FBXL14Q8N1E6 418 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 NEUROG1Q92886 237 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 OSBPL9Q96SU4 736 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 UHRF1Q96T88 793 aaPredicted RBP2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 MYLK2Q9H1R3 596 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 DUSP22Q9NRW4 184 aa2.14□□□□□ -2.07
RNU4-61P-201ENST00000411243 TCRBV7S2A1N4TA0A589 114 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 UBE2Q2LH0YL09 131 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 HAUS5O94927 633 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ARRB2P32121 409 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 MANFP55145 182 aaKnown RBP2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 LTBQ06643 244 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 GJC2Q5T442 439 aaPredicted RBP2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ADAM5Q6NVV9 412 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZNF449Q6P9G9 518 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 PQLC1Q8N2U9 271 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZNF398Q8TD17 642 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZNF414Q96IQ9 312 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 LRIG1Q96JA1 1093 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 FSD1LQ9BXM9 530 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ACTRT3Q9BYD9 372 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 RMI1Q9H9A7 625 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 PFDN2Q9UHV9 154 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 AJAP1Q9UKB5 411 aaPredicted RBP2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 ACTL7AQ9Y615 435 aa2.13□□□□□ -2.07
RNU4-61P-201ENST00000411243 FGRP09769 529 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 PCSK1P29120 753 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 ENTPD1P49961 510 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 FAM76BQ5HYJ3 339 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 RHBDF2Q6PJF5 856 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 RIN2Q8WYP3 895 aaPredicted RBP2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 NLRP4Q96MN2 994 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 NTPCRQ9BSD7 190 aaKnown RBP2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 AMBRA1Q9C0C7 1298 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 CCSER2Q9H7U1 834 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 SEMA4BQ9NPR2 832 aaPredicted RBP2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 H2AFY2Q9P0M6 372 aaPredicted RBP2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 SPATA31A3Q5VYP0 1347 aa2.12□□□□□ -2.07
RNU4-61P-201ENST00000411243 A0A1B0GUV1 79 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 CBX4O00257 560 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 RTL8CO15255 209 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 COMPP49747 757 aaPredicted RBP2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 MTX1Q13505 466 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 VPS37DQ86XT2 251 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 NSUN7Q8NE18 718 aaKnown RBP2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 GPR156Q8NFN8 814 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 LMO3Q8TAP4 145 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 HOXB13Q92826 284 aaPredicted RBP2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 MRPL4Q9BYD3 311 aaKnown RBP2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 LDAHQ9H6V9 325 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 TMEM140Q9NV12 185 aa2.11□□□□□ -2.07
RNU4-61P-201ENST00000411243 PRR23AA6NEV1 266 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 SPTLC2O15270 562 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 TRIAP1O43715 76 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 ENGP17813 658 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 ERVFC1-1P60608 527 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 MTERF2Q49AM1 385 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZC3H12BQ5HYM0 836 aaKnown RBP2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 CFAP52Q8N1V2 620 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 EFHBQ8N7U6 833 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 ZNF485Q8NCK3 441 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 ANKRD9Q96BM1 317 aaPredicted RBP2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 PCDHA7Q9UN72 937 aa2.1□□□□□ -2.07
RNU4-61P-201ENST00000411243 A0A1B0GU03 582 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 LCHNA4D1U4 455 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 KIAA0391O15091 583 aaKnown RBP2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 PAPSS2O95340 614 aaPredicted RBP2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 SP1P08047 785 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 NPSP0C0P6 89 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 CTSAP10619 480 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 SLC6A4P31645 630 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 IGFALSP35858 605 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 NDUFV1P49821 464 aa2.09□□□□□ -2.07
RNU4-61P-201ENST00000411243 PER3P56645 1201 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms