RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 SLC8B1Q6J4K2 584 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 ZNF280DQ6N043 979 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 TMC7Q7Z402 723 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 PKMYT1Q99640 499 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 NT5C1AQ9BXI3 368 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 TTYH1Q9H313 450 aaPredicted RBP16.24■□□□□ 0.19
LSM5-207ENST00000410044 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
LSM5-207ENST00000410044 MYO9BQ13459 2157 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 A8MXQ7 604 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 CLSTN1O94985 981 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 GYPCP04921 128 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 PAEPP09466 180 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
LSM5-207ENST00000410044 RAD23BP54727 409 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 SMC1AQ14683 1233 aaKnown RBP16.23■□□□□ 0.19
LSM5-207ENST00000410044 ARID5BQ14865 1188 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 PSMD5Q16401 504 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 ARHGAP44Q17R89 818 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 CTXN3Q4LDR2 81 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
LSM5-207ENST00000410044 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 TMEM176AQ96HP8 235 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 TNIP3Q96KP6 325 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 CLSTN3Q9BQT9 956 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 ELOVL4Q9GZR5 314 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 ZCWPW1Q9H0M4 648 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
LSM5-207ENST00000410044 NLRC4Q9NPP4 1024 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 TRIOBPQ9H2D6 2365 aa16.23■□□□□ 0.19
LSM5-207ENST00000410044 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 F8VZ95 297 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 PDGFRBP09619 1106 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
LSM5-207ENST00000410044 CD58P19256 250 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 CLCN1P35523 988 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 SOX5P35711 763 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 STAT1P42224 750 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 ZBED6P86452 979 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 RAPGEF1Q13905 1077 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 RAB33AQ14088 237 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 INTS6LQ5JSJ4 861 aaKnown RBP16.22■□□□□ 0.19
LSM5-207ENST00000410044 TMEM270Q6UE05 265 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 RSPO2Q6UXX9 243 aaPredicted RBP16.22■□□□□ 0.19
LSM5-207ENST00000410044 FMNL3Q8IVF7 1028 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 OR10T2Q8NGX3 314 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
LSM5-207ENST00000410044 SPAG5Q96R06 1193 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 TWNKQ96RR1 684 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 AIPL1Q9NZN9 384 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 LUC7L2Q9Y383 392 aaKnown RBP16.22■□□□□ 0.19
LSM5-207ENST00000410044 CHD9Q3L8U1 2897 aa16.22■□□□□ 0.19
LSM5-207ENST00000410044 ATG2AQ2TAZ0 1938 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 RFXAPO00287 272 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 HCRTO43612 131 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 ABLIM3O94929 683 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 CNPP09543 421 aaKnown RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 IRS1P35568 1242 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
LSM5-207ENST00000410044 BPIFB4P59827 614 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 GPR17Q13304 367 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 PTPROQ16827 1216 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 LRRTM3Q86VH5 581 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 DCP1BQ8IZD4 617 aaKnown RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 RBBP8NLQ8NC74 664 aaPredicted RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 ZNF397Q8NF99 534 aaPredicted RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 AUTS2Q8WXX7 1259 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 MRPL38Q96DV4 380 aaKnown RBP16.21■□□□□ 0.19
LSM5-207ENST00000410044 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 SYT15Q9BQS2 421 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 CRTAC1Q9NQ79 661 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 ENTPD7Q9NQZ7 604 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 MAFFQ9ULX9 164 aa16.21■□□□□ 0.19
LSM5-207ENST00000410044 MTCL1Q9Y4B5 1905 aaKnown RBP16.2■□□□□ 0.18
LSM5-207ENST00000410044 C2CD2LO14523 706 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 TEX28O15482 410 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 ATP2C2O75185 946 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 VDRP11473 427 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
LSM5-207ENST00000410044 HNRNPH3P31942 346 aaKnown RBP16.2■□□□□ 0.18
LSM5-207ENST00000410044 CASP14P31944 242 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 OR1D2P34982 312 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 NDUFV1P49821 464 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 TSPY1Q01534 308 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 ZNF697Q5TEC3 545 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 TPGS2Q68CL5 300 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 LILRA6Q6PI73 481 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 IRF2BP2Q7Z5L9 587 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms