RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 AASDHPPTQ9NRN7 309 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 KLHL11Q9NVR0 708 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 TBCCD1Q9NVR7 557 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 MAP3K2Q9Y2U5 619 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 THRAP3Q9Y2W1 955 aaKnown RBP5.55□□□□□ -1.52
CLK1-203ENST00000409769 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 ACTL7AQ9Y615 435 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 ARHGAP23Q9P227 1491 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 PIK3C2GO75747 1445 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 NRXN3Q9Y4C0 1643 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 SLC16A6O15403 523 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 POMCP01189 267 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 PDCP20941 246 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 IL10RAQ13651 578 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 UAP1L1Q3KQV9 507 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 USP45Q70EL2 814 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 SLC44A3Q8N4M1 653 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 FAM98AQ8NCA5 519 aaKnown RBP5.54□□□□□ -1.52
CLK1-203ENST00000409769 CCHCR1Q8TD31 782 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 STON2Q8WXE9 905 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 ALOXE3Q9BYJ1 711 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 RHOBTB2Q9BYZ6 727 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 GALNT9Q9HCQ5 603 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 PCDHA13Q9Y5I0 950 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 SETBP1Q9Y6X0 1596 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 TMEM2Q9UHN6 1383 aa5.54□□□□□ -1.52
CLK1-203ENST00000409769 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ADGRF5Q8IZF2 1346 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 DTNBO60941 627 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 RAP2AP10114 183 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ALAS1P13196 640 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 RAB27AP51159 221 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 NHLH1Q02575 133 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 TLE1Q04724 770 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 SCAPQ12770 1279 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ZNF169Q14929 603 aaPredicted RBP5.53□□□□□ -1.52
CLK1-203ENST00000409769 UBXN2BQ14CS0 331 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ATP2B3Q16720 1220 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ODR4Q5SWX8 454 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 TSHZ3Q63HK5 1081 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 Q6ZNX1 250 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 MED25Q71SY5 747 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 NLGN4YQ8NFZ3 816 aaPredicted RBP5.53□□□□□ -1.52
CLK1-203ENST00000409769 AIFM3Q96NN9 605 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 LRFN3Q9BTN0 628 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 RTFDC1Q9BY42 306 aaPredicted RBP5.53□□□□□ -1.52
CLK1-203ENST00000409769 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
CLK1-203ENST00000409769 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 DMTF1Q9Y222 760 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 RIMS2Q9UQ26 1411 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ADGRB1O14514 1584 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 ASXL1Q8IXJ9 1541 aa5.53□□□□□ -1.52
CLK1-203ENST00000409769 POLR1AO95602 1720 aaPredicted RBP5.52□□□□□ -1.53
CLK1-203ENST00000409769 COL11A2P13942 1736 aaPredicted RBP5.52□□□□□ -1.53
CLK1-203ENST00000409769 A0A1B0GTW7 788 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 ARIH2O95376 493 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 IL33O95760 270 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 GCSHP23434 173 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 NFE2Q16621 373 aaPredicted RBP5.52□□□□□ -1.53
CLK1-203ENST00000409769 THEMIS2Q5TEJ8 643 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 B3GNTL1Q67FW5 361 aaPredicted RBP5.52□□□□□ -1.53
CLK1-203ENST00000409769 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 GPR149Q86SP6 731 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 DCBLD1Q8N8Z6 715 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 IL17RDQ8NFM7 739 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 FBXO18Q8NFZ0 1043 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 TMX3Q96JJ7 454 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 PHACTR3Q96KR7 559 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 Q96MF0 132 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 ALG13Q9NP73 1137 aaKnown RBP5.52□□□□□ -1.53
CLK1-203ENST00000409769 LRIT1Q9P2V4 623 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 IP6K2Q9UHH9 426 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 POLHQ9Y253 713 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 ALKQ9UM73 1620 aa5.52□□□□□ -1.53
CLK1-203ENST00000409769 S100BP04271 92 aaPredicted RBP5.51□□□□□ -1.53
CLK1-203ENST00000409769 ELANEP08246 267 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 FTH1P19P0C7X4 201 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 PF4V1P10720 104 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 MTHFD1P11586 935 aaKnown RBP5.51□□□□□ -1.53
CLK1-203ENST00000409769 CYP2C19P33261 490 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 RARRES1P49788 294 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 RAP2BP61225 183 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 CXADRP78310 365 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 OCA2Q04671 838 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 PABPC1LQ4VXU2 614 aaKnown RBP5.51□□□□□ -1.53
CLK1-203ENST00000409769 ATAT1Q5SQI0 421 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 ZNF529Q6P280 563 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 HPS3Q969F9 1004 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 CLPTM1LQ96KA5 538 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 KIAA1586Q9HCI6 787 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 MAN1C1Q9NR34 630 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 SIDT1Q9NXL6 827 aaKnown RBP5.51□□□□□ -1.53
CLK1-203ENST00000409769 ZNF180Q9UJW8 692 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 KNDC1Q76NI1 1749 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 MED14O60244 1454 aa5.51□□□□□ -1.53
CLK1-203ENST00000409769 ADAMTS13Q76LX8 1427 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms