RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 INCA1Q0VD86 236 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 GPNMBQ14956 572 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CLUL1Q15846 466 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 PTGISQ16647 500 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 LRRC52Q8N7C0 313 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 TFAP2BQ92481 460 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 DPF3Q92784 378 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CD101Q93033 1021 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CXCL16Q9H2A7 254 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 LHX5Q9H2C1 402 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 MRPL47Q9HD33 250 aaKnown RBP14.96□□□□□ -0.01
LIMS2-206ENST00000409754 ARFGAP3Q9NP61 516 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 ZNF446Q9NWS9 450 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 ANAPC7Q9UJX3 599 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CEP83Q9Y592 693 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 SCINQ9Y6U3 715 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 H0YGN5 161 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 XPOTO43592 962 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SSTR3P32745 418 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SLC1A1P43005 524 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 DCAF12L1Q5VU92 463 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 MMS22LQ6ZRQ5 1243 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SLC4A11Q8NBS3 891 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 C1orf131Q8NDD1 294 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 TMEM176AQ96HP8 235 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 BTBD6Q96KE9 485 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 LRRC1Q9BTT6 524 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 ELOVL4Q9GZR5 314 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 IPPQ9Y573 584 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 CCDC66A2RUB6 948 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 CCDC188H7C350 402 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SPOPO43791 374 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 CD19P15391 556 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 AKAP5P24588 427 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 CTNNA1P35221 906 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 PEX5P50542 639 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 RNASE9P60153 205 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 MGAT3Q09327 533 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 C8orf74Q6P047 294 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SMG8Q8ND04 991 aaKnown RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 ALG3Q92685 438 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 NAP1L3Q99457 506 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-206ENST00000409754 APOL6Q9BWW8 343 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 PARP2Q9UGN5 583 aa14.95□□□□□ -0.02
LIMS2-206ENST00000409754 SMIM28A0A1B0GU29 152 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 DCDC2CA8MYV0 355 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 MYO1FO00160 1098 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 RRP9O43818 475 aaKnown RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 RPS6KA5O75582 802 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 VDRP11473 427 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 ATF7P17544 494 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 CYP3A5P20815 502 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 CYP2C18P33260 490 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 MBTPS1Q14703 1052 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 TWF2Q6IBS0 349 aaKnown RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 WDTC1Q8N5D0 677 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 KRT35Q92764 455 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 C18orf25Q96B23 403 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 RNPC3Q96LT9 517 aaKnown RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 TWNKQ96RR1 684 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 SEZ6LQ9BYH1 1024 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 PPP1R12CQ9BZL4 782 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 PRDM5Q9NQX1 630 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-206ENST00000409754 KIAA1257Q9ULG3 409 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
LIMS2-206ENST00000409754 TRIP11Q15643 1979 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 PROSCO94903 275 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 SEC31AO94979 1220 aaKnown RBP14.93□□□□□ -0.02
LIMS2-206ENST00000409754 CHRNA1P02708 482 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 EPHB4P54760 987 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 LONRF2Q1L5Z9 754 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 GLRA4Q5JXX5 417 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 BEND6Q5SZJ8 279 aaPredicted RBP14.93□□□□□ -0.02
LIMS2-206ENST00000409754 DENND1BQ6P3S1 775 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 TMEM39AQ9NV64 488 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 STIM2Q9P246 746 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 HMGXB4Q9UGU5 601 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 LCMT1Q9UIC8 334 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
LIMS2-206ENST00000409754 PDCD11Q14690 1871 aaKnown RBP14.93□□□□□ -0.02
LIMS2-206ENST00000409754 TCRBV5S1A1TA0A578 114 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 KRIT1O00522 736 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PIRO00625 290 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PPEF2O14830 753 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 FGGP02679 453 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 MAN1A1P33908 653 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PNPLA4P41247 253 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 NDST1P52848 882 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms