RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 GRSF1Q12849 480 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCRN1-203ENST00000409570 RUNX3Q13761 415 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 PTPAQ15257 358 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 PLK5Q496M5 336 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 SLC39A12Q504Y0 691 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 CMTM8Q8IZV2 173 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 SYT2Q8N9I0 419 aaPredicted RBP18.32■□□□□ 0.52
SCRN1-203ENST00000409570 BICD1Q96G01 975 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 PNMA5Q96PV4 448 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 SEPT5Q99719 369 aaPredicted RBP18.32■□□□□ 0.52
SCRN1-203ENST00000409570 LLPHQ9BRT6 129 aaKnown RBP18.32■□□□□ 0.52
SCRN1-203ENST00000409570 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
SCRN1-203ENST00000409570 PTPRDP23468 1912 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 EGFP01133 1207 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 CYP11A1P05108 521 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCRN1-203ENST00000409570 PRPHP41219 470 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 NCKAP1LP55160 1127 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 VEPH1Q14D04 833 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 HYIQ5T013 277 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 TRIM68Q6AZZ1 485 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 TMEM150AQ86TG1 271 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 KCNN1Q92952 543 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 GCNAQ96QF7 691 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 EBF3Q9H4W6 596 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 RPF1Q9H9Y2 349 aaKnown RBP18.31■□□□□ 0.52
SCRN1-203ENST00000409570 FBRSL1Q9HCM7 1045 aaKnown RBP18.31■□□□□ 0.52
SCRN1-203ENST00000409570 VPS45Q9NRW7 570 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 CCL26Q9Y258 94 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 ASCC3Q8N3C0 2202 aaKnown RBP18.31■□□□□ 0.52
SCRN1-203ENST00000409570 PI4KAP42356 2102 aa18.31■□□□□ 0.52
SCRN1-203ENST00000409570 NPHP3-ACAD11A0A0J9YXS1 232 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 LAD1O00515 517 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 PIRO00625 290 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 OGTO15294 1046 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 RNF40O75150 1001 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 PROS1P07225 676 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 SLC12A3P55017 1021 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
SCRN1-203ENST00000409570 KYAT1Q16773 422 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 C9orf57Q5W0N0 161 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 RNF43Q68DV7 783 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 JADE1Q6IE81 842 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 TCEAL6Q6IPX3 200 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 DTHD1Q6ZMT9 781 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 CAMKK1Q8N5S9 505 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 RIN3Q8TB24 985 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 HHIPQ96QV1 700 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 DUSP15Q9H1R2 295 aaPredicted RBP18.3■□□□□ 0.52
SCRN1-203ENST00000409570 ZMYM5Q9UJ78 669 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 LIMCH1Q9UPQ0 1083 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 ZFYVE26Q68DK2 2539 aa18.3■□□□□ 0.52
SCRN1-203ENST00000409570 ANO9A1A5B4 782 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
SCRN1-203ENST00000409570 ARSAP15289 507 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 PAX3P23760 479 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 LIG4P49917 911 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 PSAPL1Q6NUJ1 521 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 LRRTM3Q86VH5 581 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 MAB21L3Q8N8X9 362 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 USP13Q92995 863 aaPredicted RBP18.29■□□□□ 0.52
SCRN1-203ENST00000409570 FAM212AQ96EL1 285 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 PLIN2Q99541 437 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.29■□□□□ 0.52
SCRN1-203ENST00000409570 HELZP42694 1942 aaKnown RBP18.29■□□□□ 0.52
SCRN1-203ENST00000409570 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
SCRN1-203ENST00000409570 ASPMQ8IZT6 3477 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 PCNX2A6NKB5 2137 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 H0YCG3 227 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 PIGRP01833 764 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 F11P03951 625 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 NFICP08651 508 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 HMGA1P17096 107 aaKnown RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 GALK1P51570 392 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 NLRP12P59046 1061 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 TAF12Q16514 161 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 ARSHQ5FYA8 562 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 NAIF1Q69YI7 327 aaPredicted RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 CD302Q8IX05 232 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 KCND2Q9NZV8 630 aa18.28■□□□□ 0.52
SCRN1-203ENST00000409570 LARSQ9P2J5 1176 aaKnown RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
SCRN1-203ENST00000409570 A0A0B4J269 797 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
SCRN1-203ENST00000409570 DCLK1O15075 740 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 PLA2G4BP0C869 781 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 DRD1P21728 446 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 DDX6P26196 483 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCRN1-203ENST00000409570 AVPR1AP37288 418 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 SLC39A4Q6P5W5 647 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 KCTD17Q8N5Z5 321 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 SPPL2BQ8TCT7 592 aa18.27■□□□□ 0.52
SCRN1-203ENST00000409570 C2orf15Q8WU43 125 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms