RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TRAK2O60296 914 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 FAM13AO94988 1023 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 HOXC13P31276 330 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 ZNF131P52739 623 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 NRLP54845 237 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 LILRA4P59901 499 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 RING1Q06587 406 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 JADE1Q6IE81 842 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 ARMCX5Q6P1M9 558 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 TMC8Q8IU68 726 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 ATAD1Q8NBU5 361 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 LRRC15Q8TF66 581 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 SENP8Q96LD8 212 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 IER2Q9BTL4 223 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 MSTO1Q9BUK6 570 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 DNAJC25Q9H1X3 360 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 PARVGQ9HBI0 331 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 BLOC1S4Q9NUP1 217 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 CPSF3Q9UKF6 684 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 RAB23Q9ULC3 237 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 ASB3Q9Y575 518 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 LAMA5O15230 3695 aa9.94□□□□□ -0.82
NIF3L1-203ENST00000409129 NCANO14594 1321 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 MTMR11A4FU01 709 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 ARNTLO00327 626 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 PIRO00625 290 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CHADO15335 359 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 KRT18P05783 430 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 RETP07949 1114 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CHRNB1P11230 501 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 ODC1P11926 461 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CCNE1P24864 410 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 ABCD1P33897 745 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 LONP1P36776 959 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CCR3P51677 355 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 GTF2BQ00403 316 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 MCM6Q14566 821 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 PPP2R5DQ14738 602 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 SF3A2Q15428 464 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CSRP2Q16527 193 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 C9orf57Q5W0N0 161 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 LARP1BQ659C4 914 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 IL31Q6EBC2 164 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 SLC39A4Q6P5W5 647 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 DNAJB7Q7Z6W7 309 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 ARID3BQ8IVW6 561 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 YAF2Q8IY57 180 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 CSGALNACT1Q8TDX6 532 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 RAD54LQ92698 747 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 PSMG2Q969U7 264 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 RSPRY1Q96DX4 576 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 MSANTD3Q96H12 275 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 TMEM209Q96SK2 561 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 FIZ1Q96SL8 496 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 ZHX3Q9H4I2 956 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 C8orf33Q9H7E9 229 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 HSFX1Q9UBD0 423 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 DERAQ9Y315 318 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 IGSF10Q6WRI0 2623 aa9.93□□□□□ -0.82
NIF3L1-203ENST00000409129 MYH11P35749 1972 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ANO9A1A5B4 782 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 SRRM3A6NNA2 597 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ANKRD63C9JTQ0 380 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 TM4SF5O14894 197 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 FGF19O95750 216 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 BMP15O95972 392 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 CYP11A1P05108 521 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 NFICP08651 508 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 PLCG1P19174 1290 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 NMT1P30419 496 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 DDIT3P35638 169 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 CXCL12P48061 93 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 TUFMP49411 452 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ACOT2P49753 483 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 KPNA1P52294 538 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 FCHO2Q0JRZ9 810 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 TMEM132DQ14C87 1099 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 KARSQ15046 597 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 STXBP5Q5T5C0 1151 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 SLFN12LQ6IEE8 588 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 C1orf228Q6PIY5 440 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 LRSAM1Q6UWE0 723 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 GAREM2Q75VX8 874 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ITIH5Q86UX2 942 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 TTC9BQ8N6N2 239 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 CELF5Q8N6W0 485 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 LRRC3BQ96PB8 259 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ATXN3LQ9H3M9 355 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 ASB7Q9H672 318 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 DSEQ9UL01 958 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 SMC3Q9UQE7 1217 aa9.92□□□□□ -0.82
NIF3L1-203ENST00000409129 HELZ2Q9BYK8 2649 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms