RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LRRC52Q8N7C0 313 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 HEBP1Q9NRV9 189 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 AGPAT3Q9NRZ7 376 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 INTS13Q9NVM9 706 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 ASB3Q9Y575 518 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 CLIC2O15247 247 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 TUFMP49411 452 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 RBP5P82980 135 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 RDH13Q8NBN7 331 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 FAM200AQ8TCP9 573 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 TRMT61BQ9BVS5 477 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 TRPV4Q9HBA0 871 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 SLC39A2Q9NP94 309 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 ABI2Q9NYB9 513 aaPredicted RBP20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 SERTAD1Q9UHV2 236 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 SNX9Q9Y5X1 595 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 PTPRZ1P23471 2315 aaPredicted RBP20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 HUS1O60921 280 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 NBL1P41271 181 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 UBXN2BQ14CS0 331 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 TPRG1Q6ZUI0 275 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 FRMD5Q7Z6J6 570 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 GIPC2Q8TF65 315 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 RSPRY1Q96DX4 576 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 ANKRD36BP1Q96IX9 119 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 MKNK1Q9BUB5 465 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 BRD9Q9H8M2 597 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 GDAP2Q9NXN4 497 aa20.75■□□□□ 0.91
SMARCB1-204ENST00000407422 COL4A2P08572 1712 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 SHISA7A6NL88 538 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 PROB1E7EW31 1015 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 HCRTO43612 131 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 ACTN4O43707 911 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 GFRA3O60609 400 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 HAPLN1P10915 354 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 PSMC3P17980 439 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 ACAT1P24752 427 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 GABRR2P28476 465 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 CYP2J2P51589 502 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 ITIH5Q86UX2 942 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 OSTM1Q86WC4 334 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 DCP1BQ8IZD4 617 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 SPPL2BQ8TCT7 592 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 C2orf15Q8WU43 125 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 GPR88Q9GZN0 384 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 ATXN3LQ9H3M9 355 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 DDX43Q9NXZ2 648 aaKnown RBP20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 DENND4CQ5VZ89 1909 aa20.74■□□□□ 0.91
SMARCB1-204ENST00000407422 UBE4BO95155 1302 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 PVALEFA0A1B0GWK0 134 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 FAM170BA6NMN3 283 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 GDI1P31150 447 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 TSPY1Q01534 308 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 SMARCB1Q12824 385 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 CCDC142Q17RM4 750 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 CEP57L1Q8IYX8 460 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 KIAA1586Q9HCI6 787 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 LTB4R2Q9NPC1 389 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 FAM186AA6NE01 2351 aa20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 NUP210Q8TEM1 1887 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-204ENST00000407422 A0A1B0GVL5 298 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 HEPACAM2A8MVW5 462 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 KLRC4O43908 158 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 TNNC2P02585 160 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 GPR15P49685 360 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 SURF1Q15526 300 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 DUOXA2Q1HG44 320 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 BMT2Q1RMZ1 405 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 SOWAHAQ2M3V2 549 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 ASCL5Q7RTU5 278 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 MFSD6LQ8IWD5 586 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 TMEM86AQ8N2M4 240 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 STKLD1Q8NE28 680 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 DNASE1L2Q92874 299 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 PAGE5Q96GU1 130 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 HPDLQ96IR7 371 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 ACBD6Q9BR61 282 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 PI4K2AQ9BTU6 479 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 IL21Q9HBE4 155 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 PCDHB5Q9Y5E4 795 aa20.72■□□□□ 0.91
SMARCB1-204ENST00000407422 DLATP10515 647 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 PFKFB1P16118 471 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 TARSP26639 723 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 CYP4F8P98187 520 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 GPR158Q5T848 1215 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 WDR49Q8IV35 697 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 ARID3BQ8IVW6 561 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 C1orf210Q8IVY1 113 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 ADGRF2Q8IZF7 708 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 TOP6BLQ8N6T0 577 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 CCDC127Q96BQ5 260 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 SPATA32Q96LK8 384 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 LRRC3BQ96PB8 259 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 PKMYT1Q99640 499 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 PATJQ8NI35 1801 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 OBSL1O75147 1896 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms