RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ALG13Q9NP73 1137 aaKnown RBP12.55□□□□□ -0.4
PCNX4-204ENST00000406949 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
PCNX4-204ENST00000406949 HEY1Q9Y5J3 304 aa12.55□□□□□ -0.4
PCNX4-204ENST00000406949 MED7O43513 233 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 GH1P01241 217 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 RTP1P59025 263 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 CEP128Q6ZU80 1094 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 KLHL29Q96CT2 875 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 ZBED3Q96IU2 234 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 MMP19Q99542 508 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 FAM49AQ9H0Q0 323 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 BTBD7Q9P203 1132 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 MCF2LO15068 1137 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 FARP2O94887 1054 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 MMP13P45452 471 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 IREB2P48200 963 aaKnown RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 METTL7BQ6UX53 244 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 SPOCD1Q6ZMY3 1216 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 KIF2BQ8N4N8 673 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 F5H423 210 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 IRF6O14896 467 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 GRIN3BO60391 1043 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 EZRP15311 586 aaKnown RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 PECAM1P16284 738 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 ZBTB16Q05516 673 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 SURF1Q15526 300 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 CNGA2Q16280 664 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 PPP6R3Q5H9R7 873 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 CRELD2Q6UXH1 353 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 WDR49Q8IV35 697 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 CPB2Q96IY4 423 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
PCNX4-204ENST00000406949 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
PCNX4-204ENST00000406949 SYNJ2BP-COX16A0A087WUM0 186 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PMM2O15305 246 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 P4HA1P13674 534 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 MAP3K10Q02779 954 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 DNAJC3Q13217 504 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 HIF1AQ16665 826 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 C2orf40Q9H1Z8 148 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 COX16Q9P0S2 106 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PGAP2Q9UHJ9 254 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 RFC1P35251 1148 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 CDH6P55285 790 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 OTUD4Q01804 1114 aaKnown RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PIGHQ14442 188 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 STAT4Q14765 748 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PPP1R21Q6ZMI0 780 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TMEM130Q8N3G9 435 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 CCHCR1Q8TD31 782 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 ABCF3Q9NUQ8 709 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 USP15Q9Y4E8 981 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 MAFBQ9Y5Q3 323 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 VTNP04004 478 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 CYP1A1P04798 512 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 PHBP35232 272 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 SIX1Q15475 284 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-204ENST00000406949 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 GLIS1Q8NBF1 620 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 P3H4Q92791 437 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
PCNX4-204ENST00000406949 DNM1LO00429 736 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms