RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 YWHAHQ04917 246 aaPredicted RBP11.09□□□□□ -0.63
CHEK2-208ENST00000404276 ASIC2Q16515 512 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
CHEK2-208ENST00000404276 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
CHEK2-208ENST00000404276 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 CRYBG2Q8N1P7 616 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 OLIG1Q8TAK6 271 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
CHEK2-208ENST00000404276 TMEM176AQ96HP8 235 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 CHP1Q99653 195 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 PLVAPQ9BX97 442 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 SNX25Q9H3E2 840 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 DPEP3Q9H4B8 488 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 DDX43Q9NXZ2 648 aaKnown RBP11.09□□□□□ -0.63
CHEK2-208ENST00000404276 ARHGAP20Q9P2F6 1191 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 PLXNA4Q9HCM2 1894 aa11.09□□□□□ -0.63
CHEK2-208ENST00000404276 TBC1D4O60343 1298 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 SERPING1P05155 500 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 SKILP12757 684 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ACAT1P24752 427 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 CTNNB1P35222 781 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 BPIFB4P59827 614 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PTK2Q05397 1052 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ACOT1Q86TX2 421 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 NOP9Q86U38 636 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 METTL23Q86XA0 190 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 OR10T2Q8NGX3 314 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 TFAP2BQ92481 460 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ACBD6Q9BR61 282 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ZNHIT6Q9NWK9 470 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 REV3LO60673 3130 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ATP2C2O75185 946 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 CCDC172P0C7W6 258 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PCSK1P29120 753 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 GNA15P30679 374 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ERVK-21P61565 698 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 DSG1Q02413 1049 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 KRT17Q04695 432 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 RAB30Q15771 203 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 CCDC142Q17RM4 750 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 ZNF571Q7Z3V5 609 aaPredicted RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 B3GALNT2Q8NCR0 500 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 LNX1Q8TBB1 728 aaPredicted RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 SLC20A1Q8WUM9 679 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PIK3R5Q8WYR1 880 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 PKMYT1Q99640 499 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 BAG1Q99933 345 aaPredicted RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 LPIN3Q9BQK8 851 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 HERC2P3Q9BVR0 1158 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
CHEK2-208ENST00000404276 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
CHEK2-208ENST00000404276 RB1P06400 928 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 CHRNB2P17787 502 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 PDE6CP51160 858 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 PSMC1P62191 440 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 CCZ1BP86790 482 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 CCZ1P86791 482 aaPredicted RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 ASTE1Q2TB18 679 aaPredicted RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 RSPO2Q6UXX9 243 aaPredicted RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 LRRTM3Q86VH5 581 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 VPS52Q8N1B4 723 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 ZNF606Q8WXB4 792 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 HEXIM2Q96MH2 286 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 TMEM209Q96SK2 561 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 SYT15Q9BQS2 421 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 KCNF1Q9H3M0 494 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 ALG13Q9NP73 1137 aaKnown RBP11.07□□□□□ -0.64
CHEK2-208ENST00000404276 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 CDH9Q9ULB4 789 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 MTUS1Q9ULD2 1270 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 KIAA1257Q9ULG3 409 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 LZTS1Q9Y250 596 aa11.07□□□□□ -0.64
CHEK2-208ENST00000404276 SSU72P8A0A1W2PR75 194 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 O00370 1275 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 THAP12O43422 761 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 MMEP08473 750 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 CFHP08603 1231 aa11.06□□□□□ -0.64
CHEK2-208ENST00000404276 VDRP11473 427 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms