RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TMEM86AQ8N2M4 240 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 ZSCAN18Q8TBC5 510 aaPredicted RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 SPPL2BQ8TCT7 592 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 C2orf15Q8WU43 125 aaKnown RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 SMARCD2Q92925 531 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 PSMG2Q969U7 264 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 HPDLQ96IR7 371 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 ASB16Q96NS5 453 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 LRRC3Q9BY71 257 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 GPR88Q9GZN0 384 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 SCAND2PQ9GZW5 306 aaPredicted RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 FAM86C1Q9NVL1 165 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 DDX43Q9NXZ2 648 aaKnown RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 CGNQ9P2M7 1197 aaKnown RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 SIT1Q9Y3P8 196 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 CACNA1HO95180 2353 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 DCNP07585 359 aaKnown RBP14.3□□□□□ -0.12
SDF4-203ENST00000403997 HAPLN1P10915 354 aaPredicted RBP14.3□□□□□ -0.12
SDF4-203ENST00000403997 FCARP24071 287 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 VIPR2P41587 438 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 NDUFA8P51970 172 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 STARD6P59095 220 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 MYL7Q01449 175 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 CYP24A1Q07973 514 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 STK4Q13043 487 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 PSMD2Q13200 908 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 GRM2Q14416 872 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 BECN1Q14457 450 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 PSMD6Q15008 389 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 MLF2Q15773 248 aaPredicted RBP14.3□□□□□ -0.12
SDF4-203ENST00000403997 BMT2Q1RMZ1 405 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 WDR49Q8IV35 697 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 DTWD2Q8NBA8 298 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 GIPC2Q8TF65 315 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 CCDC127Q96BQ5 260 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 ACBD6Q9BR61 282 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 TRMT61BQ9BVS5 477 aaKnown RBP14.3□□□□□ -0.12
SDF4-203ENST00000403997 ATXN3LQ9H3M9 355 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 ZNF334Q9HCZ1 680 aaPredicted RBP14.3□□□□□ -0.12
SDF4-203ENST00000403997 TMLHEQ9NVH6 421 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 HPSEQ9Y251 543 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 PCDHB5Q9Y5E4 795 aa14.3□□□□□ -0.12
SDF4-203ENST00000403997 TCHHQ07283 1943 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 EXOC3O60645 756 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
SDF4-203ENST00000403997 FGF19O95750 216 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 ATF6P18850 670 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 ACAT1P24752 427 aaKnown RBP14.29□□□□□ -0.12
SDF4-203ENST00000403997 GABRR2P28476 465 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 LHX1P48742 406 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 PRKCQQ04759 706 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 NFE2Q16621 373 aaPredicted RBP14.29□□□□□ -0.12
SDF4-203ENST00000403997 SOWAHAQ2M3V2 549 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 ARHGAP15Q53QZ3 475 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 GAREM2Q75VX8 874 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 C12orf56Q8IXR9 622 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 ADGRF2Q8IZF7 708 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 GOLGA5Q8TBA6 731 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 MMS19Q96T76 1030 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 PI4K2AQ9BTU6 479 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 FOXQ1Q9C009 403 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
SDF4-203ENST00000403997 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
SDF4-203ENST00000403997 MYL1P05976 194 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 PCSK1P29120 753 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 GDI1P31150 447 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 UBXN2BQ14CS0 331 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 INTS6LQ5JSJ4 861 aaKnown RBP14.28□□□□□ -0.12
SDF4-203ENST00000403997 GPR158Q5T848 1215 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 VITQ6UXI7 678 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 DPH6Q7L8W6 267 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 OSTM1Q86WC4 334 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 KIAA0895Q8NCT3 520 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
SDF4-203ENST00000403997 GCNAQ96QF7 691 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 TRPV4Q9HBA0 871 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 GTF3C4Q9UKN8 822 aa14.28□□□□□ -0.12
SDF4-203ENST00000403997 FAM237AA0A1B0GTK4 181 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 A0A1W2PQ27 194 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 A0A1W2PQ64 194 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 A0A1W2PQD8 194 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 FAM170BA6NMN3 283 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 HEPACAM2A8MVW5 462 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 GABRDO14764 452 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms