RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 GOLGA8JA6NMD2 632 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 LACTBL1A8MY62 500 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 I3L4J1 428 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 M0R296 226 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 RFPL2O75678 378 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 FGFR1OPO95684 399 aaKnown RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 MATR3P43243 847 aaKnown RBP eCLIP9.92□□□□□ -0.829e-10■■□□□ 13.9
VPS53-203ENST00000401468 YARSP54577 528 aaKnown RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 STX17P56962 302 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 SH3BP2P78314 561 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 BFSP1Q12934 665 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 GRIK3Q13003 919 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 EFCAB13Q8IY85 973 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 FAM186BQ8IYM0 893 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 FAM200AQ8TCP9 573 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 CASP10Q92851 521 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 SLC35C1Q96A29 364 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 KLHL5Q96PQ7 755 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 POP1Q99575 1024 aaKnown RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 CDCA3Q99618 268 aaPredicted RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 SRRTQ9BXP5 876 aaKnown RBP9.92□□□□□ -0.82
VPS53-203ENST00000401468 ADAM7Q9H2U9 754 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 GOLGA2P5Q9HBQ8 144 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 CBX8Q9HC52 389 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 NFE2L3Q9Y4A8 694 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 PKD1L2Q7Z442 2459 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 CACNA1GO43497 2377 aa9.92□□□□□ -0.82
VPS53-203ENST00000401468 ANO9A1A5B4 782 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 LRRIQ3A6PVS8 624 aaPredicted RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 EFEMP2O95967 443 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 ALDH2P05091 517 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 THP07101 528 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 EEF1GP26641 437 aaKnown RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 LRPAP1P30533 357 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 GTF2H1P32780 548 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 CDR1P51861 262 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 AP3M2P53677 418 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 ZXDAP98168 799 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 SOX4Q06945 474 aaPredicted RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 KCNH2Q12809 1159 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 CEP135Q66GS9 1140 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 DESI1Q6ICB0 168 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 PDE12Q6L8Q7 609 aaKnown RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 EDAQ92838 391 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 KCNH6Q9H252 994 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 PDE11AQ9HCR9 933 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 MAN1C1Q9NR34 630 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 SAMSN1Q9NSI8 373 aaKnown RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 FAM86C1Q9NVL1 165 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 INTS13Q9NVM9 706 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 FANCLQ9NW38 375 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
VPS53-203ENST00000401468 ARMCX3Q9UH62 379 aaPredicted RBP9.91□□□□□ -0.82
VPS53-203ENST00000401468 CARNS1A5YM72 827 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 SMTNL1A8MU46 457 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TMEM189-UBE2V1I3L0A0 370 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TEX28O15482 410 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 ADAM12O43184 909 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 KIF4AO95239 1232 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 C4BPAP04003 597 aaKnown RBP9.9□□□□□ -0.82
VPS53-203ENST00000401468 URODP06132 367 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 NFICP08651 508 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 GLUD2P49448 558 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 CLCN4P51793 760 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 VAMP7P51809 220 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 DLG4P78352 724 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TUSC3Q13454 348 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TMEM132DQ14C87 1099 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 ZACNQ401N2 412 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TCP11X2Q5H9J9 407 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 MIIPQ5JXC2 388 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 CES5AQ6NT32 575 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TREML4Q6UXN2 200 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 USP37Q86T82 979 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 FAM114A1Q8IWE2 563 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 KREMEN2Q8NCW0 462 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 RSAD2Q8WXG1 361 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 RIN2Q8WYP3 895 aaPredicted RBP9.9□□□□□ -0.82
VPS53-203ENST00000401468 EEF2KMTQ96G04 330 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 CNOT6LQ96LI5 555 aaKnown RBP9.9□□□□□ -0.82
VPS53-203ENST00000401468 UROC1Q96N76 676 aa9.9□□□□□ -0.82
VPS53-203ENST00000401468 RPS6KC1Q96S38 1066 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms